RNA–Protein interactions for RNA: ENST00000427408.1

SSUH2-206, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 3

Gene SSUH2, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-206ENST00000427408 CDH23Q9H251 3354 aa15.9■□□□□ 0.14
SSUH2-206ENST00000427408 PPP1R11O60927 126 aaPredicted RBP15.9■□□□□ 0.14
SSUH2-206ENST00000427408 TXNP10599 105 aaKnown RBP15.9■□□□□ 0.14
SSUH2-206ENST00000427408 PBX2P40425 430 aa15.9■□□□□ 0.14
SSUH2-206ENST00000427408 CCDC62Q6P9F0 684 aa15.9■□□□□ 0.14
SSUH2-206ENST00000427408 VWCEQ96DN2 955 aa15.9■□□□□ 0.14
SSUH2-206ENST00000427408 MTG1Q9BT17 334 aaPredicted RBP15.9■□□□□ 0.14
SSUH2-206ENST00000427408 WNT8AQ9H1J5 351 aa15.9■□□□□ 0.14
SSUH2-206ENST00000427408 IL23AQ9NPF7 189 aa15.9■□□□□ 0.14
SSUH2-206ENST00000427408 POLR3EQ9NVU0 708 aa15.9■□□□□ 0.14
SSUH2-206ENST00000427408 CXXC1Q9P0U4 656 aaPredicted RBP15.9■□□□□ 0.14
SSUH2-206ENST00000427408 MAD2L2Q9UI95 211 aa15.9■□□□□ 0.14
SSUH2-206ENST00000427408 MRPL11Q9Y3B7 192 aaKnown RBP15.9■□□□□ 0.14
SSUH2-206ENST00000427408 RAD50Q92878 1312 aa15.9■□□□□ 0.14
SSUH2-206ENST00000427408 PRUNE2Q8WUY3 3088 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 PALM3A6NDB9 673 aaPredicted RBP15.89■□□□□ 0.13
SSUH2-206ENST00000427408 A6NJR5 290 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 KLRF2D3W0D1 207 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 OPLAHO14841 1288 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 CYP2C9P11712 490 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 DNAJB2P25686 324 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 CPT1AP50416 773 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 GRIN2CQ14957 1233 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 NBPF20Q3BBV1 942 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 SEPT14Q6ZU15 432 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 STOX1Q6ZVD7 989 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 CHST3Q7LGC8 479 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 NSUN6Q8TEA1 469 aaKnown RBP15.89■□□□□ 0.13
SSUH2-206ENST00000427408 MTMR8Q96EF0 704 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 RMDN3Q96TC7 470 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 MPHOSPH6Q99547 160 aaKnown RBP15.89■□□□□ 0.13
SSUH2-206ENST00000427408 SEZ6LQ9BYH1 1024 aa15.89■□□□□ 0.13
SSUH2-206ENST00000427408 NKRFO15226 690 aaKnown RBP eCLIP15.88■□□□□ 0.13
SSUH2-206ENST00000427408 SGSM2O43147 1006 aa15.88■□□□□ 0.13
SSUH2-206ENST00000427408 TTLL4Q14679 1199 aa15.88■□□□□ 0.13
SSUH2-206ENST00000427408 LY6KQ17RY6 165 aa15.88■□□□□ 0.13
SSUH2-206ENST00000427408 PSRC1Q6PGN9 363 aaPredicted RBP15.88■□□□□ 0.13
SSUH2-206ENST00000427408 MCF2L2Q86YR7 1114 aa15.88■□□□□ 0.13
SSUH2-206ENST00000427408 RUFY2Q8WXA3 655 aa15.88■□□□□ 0.13
SSUH2-206ENST00000427408 HERVK_113Q902F9 699 aa15.88■□□□□ 0.13
SSUH2-206ENST00000427408 SCLYQ96I15 445 aa15.88■□□□□ 0.13
SSUH2-206ENST00000427408 GPHNQ9NQX3 736 aaPredicted RBP15.88■□□□□ 0.13
SSUH2-206ENST00000427408 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
SSUH2-206ENST00000427408 EYSQ5T1H1 3165 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 B4DLN1 442 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 E7EWF7 191 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 IFIT3O14879 490 aaKnown RBP15.87■□□□□ 0.13
SSUH2-206ENST00000427408 CFBP00751 764 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 FGBP02675 491 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 EIF2AK2P19525 551 aaKnown RBP15.87■□□□□ 0.13
SSUH2-206ENST00000427408 MRPL12P52815 198 aaKnown RBP15.87■□□□□ 0.13
SSUH2-206ENST00000427408 TRDNQ13061 729 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 GRM4Q14833 912 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 BRDTQ58F21 947 aaPredicted RBP15.87■□□□□ 0.13
SSUH2-206ENST00000427408 FAM47CQ5HY64 1035 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 ARHGEF16Q5VV41 709 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 OTOP2Q7RTS6 562 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 MAFAQ8NHW3 353 aaPredicted RBP15.87■□□□□ 0.13
SSUH2-206ENST00000427408 AFG1LQ8WV93 481 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 TIFAQ96CG3 184 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 AMNQ9BXJ7 453 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 PBX4Q9BYU1 374 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 MYO9BQ13459 2157 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 LAMA4Q16363 1823 aa15.87■□□□□ 0.13
SSUH2-206ENST00000427408 TMEM265A0A087WTH1 108 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 ZBTB5O15062 677 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 NR3C2P08235 984 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 ANTXR2P58335 489 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 CHMP4BP1P59074 171 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 ARHGAP1Q07960 439 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 PIGSQ96S52 555 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 IWS1Q96ST2 819 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 MAF1Q9H063 256 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 ZNF576Q9H609 170 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 PCDHA1Q9Y5I3 950 aa15.86■□□□□ 0.13
SSUH2-206ENST00000427408 CYTH3O43739 400 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 KPNA6O60684 536 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 SUPT20HL2P0C7V6 817 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 FOSL2P15408 326 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
SSUH2-206ENST00000427408 HSD17B4P51659 736 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 STXBP2Q15833 593 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 HOMER1Q86YM7 354 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.85■□□□□ 0.13
SSUH2-206ENST00000427408 KAT2BQ92831 832 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 MAP4K1Q92918 833 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 RIOX1Q9H6W3 641 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 PXMP2Q9NR77 195 aa15.85■□□□□ 0.13
SSUH2-206ENST00000427408 DDX41Q9UJV9 622 aaKnown RBP15.85■□□□□ 0.13
SSUH2-206ENST00000427408 RBAK-RBAKDNI3L0D1 243 aa15.84■□□□□ 0.13
SSUH2-206ENST00000427408 EIF3JO75822 258 aaKnown RBP15.84■□□□□ 0.13
SSUH2-206ENST00000427408 GH1P01241 217 aa15.84■□□□□ 0.13
SSUH2-206ENST00000427408 MMP3P08254 477 aa15.84■□□□□ 0.13
SSUH2-206ENST00000427408 TROAPQ12815 778 aa15.84■□□□□ 0.13
SSUH2-206ENST00000427408 COL9A3Q14050 684 aaPredicted RBP15.84■□□□□ 0.13
SSUH2-206ENST00000427408 WTAPQ15007 396 aa15.84■□□□□ 0.13
SSUH2-206ENST00000427408 NFRKBQ6P4R8 1299 aa15.84■□□□□ 0.13
SSUH2-206ENST00000427408 MB21D2Q8IYB1 491 aaPredicted RBP15.84■□□□□ 0.13
SSUH2-206ENST00000427408 NCOA7Q8NI08 942 aa15.84■□□□□ 0.13
SSUH2-206ENST00000427408 IL31RAQ8NI17 732 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms