RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 SRGNP10124 158 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 OR8K1Q8NGG5 319 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 SNX29Q8TEQ0 813 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 C7orf25Q9BPX7 421 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 COA1Q9GZY4 146 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 RCCD1A6NED2 376 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 G3V3G9 751 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 SNHG28P0DPA3 235 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 TRIM21P19474 475 aaKnown RBP12.99□□□□□ -0.33
FIRRE-201ENST00000427391 EEF1GP26641 437 aaKnown RBP12.99□□□□□ -0.33
FIRRE-201ENST00000427391 CHMP4BP1P59074 171 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 MIIPQ5JXC2 388 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 CERS3Q8IU89 383 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 KLRG2A4D1S0 409 aaPredicted RBP12.99□□□□□ -0.33
FIRRE-201ENST00000427391 EPHB6O15197 1021 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 HERVK_113P62684 666 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 CYP27A1Q02318 531 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
FIRRE-201ENST00000427391 RAD51AP2Q09MP3 1159 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 ASPRV1Q53RT3 343 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 NCAPH2Q6IBW4 605 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 SV2BQ7L1I2 683 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 COL23A1Q86Y22 540 aaPredicted RBP12.99□□□□□ -0.33
FIRRE-201ENST00000427391 DHTKD1Q96HY7 919 aaPredicted RBP12.99□□□□□ -0.33
FIRRE-201ENST00000427391 CDK5RAP3Q96JB5 506 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 NOC4LQ9BVI4 516 aaKnown RBP12.99□□□□□ -0.33
FIRRE-201ENST00000427391 TBC1D7Q9P0N9 293 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 DUSP10Q9Y6W6 482 aa12.99□□□□□ -0.33
FIRRE-201ENST00000427391 CTAGE9A4FU28 777 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 SSBP05455 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
FIRRE-201ENST00000427391 PLEKP08567 350 aaPredicted RBP12.98□□□□□ -0.33
FIRRE-201ENST00000427391 NT5C2P49902 561 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 BMS1Q14692 1282 aaKnown RBP12.98□□□□□ -0.33
FIRRE-201ENST00000427391 CCDC155Q8N6L0 562 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 LARP4BQ92615 738 aaKnown RBP12.98□□□□□ -0.33
FIRRE-201ENST00000427391 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.331e-6■■□□□ 14.5
FIRRE-201ENST00000427391 FGFBP2Q9BYJ0 223 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
FIRRE-201ENST00000427391 CDC23Q9UJX2 597 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 ESYT2A0FGR8 921 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 DDTLA6NHG4 134 aaPredicted RBP12.98□□□□□ -0.33
FIRRE-201ENST00000427391 TBC1D8O95759 1140 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 RHOXF2BP0C7M4 288 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 RBM5P52756 815 aaKnown RBP eCLIP12.98□□□□□ -0.33
FIRRE-201ENST00000427391 CC2D1AQ6P1N0 951 aaPredicted RBP12.98□□□□□ -0.33
FIRRE-201ENST00000427391 GOLGA1Q92805 767 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 HAS1Q92839 578 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 DNAJC7Q99615 494 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 RHOXF2Q9BQY4 288 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 ARGLU1Q9NWB6 273 aaPredicted RBP12.98□□□□□ -0.33
FIRRE-201ENST00000427391 CAPN11Q9UMQ6 739 aa12.98□□□□□ -0.33
FIRRE-201ENST00000427391 PNMA6FA0A0J9YX94 578 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 APBA3O96018 575 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 EN1Q05925 392 aaPredicted RBP12.97□□□□□ -0.33
FIRRE-201ENST00000427391 TRIM14Q14142 442 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 KRT26Q7Z3Y9 468 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 SRGAP1Q7Z6B7 1085 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 GPR161Q8N6U8 529 aaKnown RBP12.97□□□□□ -0.33
FIRRE-201ENST00000427391 PNKPQ96T60 521 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 TTYH3Q9C0H2 523 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 LACRTQ9GZZ8 138 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 CUEDC2Q9H467 287 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 KANSL2Q9H9L4 492 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 ZCCHC17Q9NP64 241 aaKnown RBP12.97□□□□□ -0.33
FIRRE-201ENST00000427391 POLR3GO15318 223 aaPredicted RBP12.97□□□□□ -0.33
FIRRE-201ENST00000427391 SRGAP2O75044 1071 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 MYL1P05976 194 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 MMP10P09238 476 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 SMARCA1P28370 1054 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 DNM2P50570 870 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 LTBP1Q14766 1721 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 TMEM132AQ24JP5 1023 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 ANKRD31Q8N7Z5 1873 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 DDX12PQ92771 950 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 NAPGQ99747 312 aaPredicted RBP12.97□□□□□ -0.33
FIRRE-201ENST00000427391 ANKZF1Q9H8Y5 726 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 SUGCTQ9HAC7 445 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 FAM207AQ9NSI2 230 aaPredicted RBP12.97□□□□□ -0.33
FIRRE-201ENST00000427391 PLIN4Q96Q06 1357 aa12.97□□□□□ -0.33
FIRRE-201ENST00000427391 NPHP3-ACAD11A0A0J9YXS1 232 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 A0A1W2PQC6 194 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 STAT3P40763 770 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 CRKP46108 304 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 ZNF771Q7L3S4 317 aaPredicted RBP12.96□□□□□ -0.33
FIRRE-201ENST00000427391 ZSCAN29Q8IWY8 852 aaPredicted RBP12.96□□□□□ -0.33
FIRRE-201ENST00000427391 NOA1Q8NC60 698 aaKnown RBP12.96□□□□□ -0.33
FIRRE-201ENST00000427391 TEKT1Q969V4 418 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 CCDC47Q96A33 483 aaKnown RBP12.96□□□□□ -0.33
FIRRE-201ENST00000427391 RIC8AQ9NPQ8 531 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 DDX25Q9UHL0 483 aaKnown RBP12.96□□□□□ -0.33
FIRRE-201ENST00000427391 MARCH6O60337 910 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 GDF11O95390 407 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 RABGGTAQ92696 567 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 RAD54LQ92698 747 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 P2RX7Q99572 595 aaKnown RBP12.96□□□□□ -0.33
FIRRE-201ENST00000427391 PSTPIP2Q9H939 334 aa12.96□□□□□ -0.33
FIRRE-201ENST00000427391 MYH7BA7E2Y1 1941 aa12.96□□□□□ -0.34
FIRRE-201ENST00000427391 E9PMD0 336 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms