RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 FANCBQ8NB91 859 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 NUP133Q8WUM0 1156 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 MTMR8Q96EF0 704 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 TRIM47Q96LD4 638 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
LINC01049-201ENST00000426840 SPATC1LQ9H0A9 340 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 PORCNQ9H237 461 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 RANBP17Q9H2T7 1088 aaKnown RBP8.63□□□□□ -1.03
LINC01049-201ENST00000426840 RIOX1Q9H6W3 641 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 JMJD4Q9H9V9 463 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 EFCC1Q9HA90 598 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 RAVER2Q9HCJ3 691 aaKnown RBP8.63□□□□□ -1.03
LINC01049-201ENST00000426840 GJD2Q9UKL4 321 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 ISY1Q9ULR0 285 aaKnown RBP8.63□□□□□ -1.03
LINC01049-201ENST00000426840 RIPK3Q9Y572 518 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 SLC12A7Q9Y666 1083 aa8.63□□□□□ -1.03
LINC01049-201ENST00000426840 PCNTO95613 3336 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 BAZ2BQ9UIF8 2168 aaKnown RBP8.62□□□□□ -1.03
LINC01049-201ENST00000426840 COL11A1P12107 1806 aaPredicted RBP8.62□□□□□ -1.03
LINC01049-201ENST00000426840 ZBTB43O43298 467 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 CYTH3O43739 400 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 SMARCA1P28370 1054 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 PDIA3P30101 505 aaKnown RBP8.62□□□□□ -1.03
LINC01049-201ENST00000426840 CDC27P30260 824 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 NEK4P51957 841 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 OAZ1P54368 228 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 SYNE3Q6ZMZ3 975 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 OTOP1Q7RTM1 612 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 RIOX2Q8IUF8 465 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 CPXCR1Q8N123 301 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 SRBD1Q8N5C6 995 aaKnown RBP8.62□□□□□ -1.03
LINC01049-201ENST00000426840 SHCBP1Q8NEM2 672 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 CTCFLQ8NI51 663 aaPredicted RBP8.62□□□□□ -1.03
LINC01049-201ENST00000426840 ZNF274Q96GC6 653 aaPredicted RBP8.62□□□□□ -1.03
LINC01049-201ENST00000426840 AGBL1Q96MI9 1066 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 TBC1D32Q96NH3 1257 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 VAT1LQ9HCJ6 419 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 EVA1BQ9NVM1 165 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 MAP10Q9P2G4 905 aa8.62□□□□□ -1.03
LINC01049-201ENST00000426840 A0A0G2JMZ2 1700 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 PLEKHA8P1O95397 391 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 SLC25A27O95847 323 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 ERCC3P19447 782 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 MAPK4P31152 587 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 KIF5BP33176 963 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 ADD1P35611 737 aaKnown RBP8.61□□□□□ -1.03
LINC01049-201ENST00000426840 RCAN1P53805 252 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 AK2P54819 239 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 FCGRTP55899 365 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 CCNA1P78396 465 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 FGD1P98174 961 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 KCNH2Q12809 1159 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 PLS1Q14651 629 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 KIF22Q14807 665 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 LINC01559Q495D7 138 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 CCDC174Q6PII3 467 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 PLEKHH3Q7Z736 793 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 MICU3Q86XE3 530 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 CCDC144CPQ8IYA2 1237 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 USP6NLQ92738 828 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 TEX13BQ9BXU2 312 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 UNC93B1Q9H1C4 597 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 UPF2Q9HAU5 1272 aaKnown RBP8.61□□□□□ -1.03
LINC01049-201ENST00000426840 GABRQQ9UN88 632 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 ZSWIM8A7E2V4 1837 aa8.61□□□□□ -1.03
LINC01049-201ENST00000426840 MGAMO43451 1857 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 TNPO2O14787 897 aaKnown RBP8.6□□□□□ -1.03
LINC01049-201ENST00000426840 PPP1R11O60927 126 aaPredicted RBP8.6□□□□□ -1.03
LINC01049-201ENST00000426840 AP1G2O75843 785 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 GNRH1P01148 92 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 ICAM1P05362 532 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 TAL1P17542 331 aaPredicted RBP8.6□□□□□ -1.03
LINC01049-201ENST00000426840 HOXD10P28358 340 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 GNAQP50148 359 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 ARHGEF6Q15052 776 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 PPP2R5BQ15173 497 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 CDC37Q16543 378 aaPredicted RBP8.6□□□□□ -1.03
LINC01049-201ENST00000426840 RTN1Q16799 776 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 QRICH1Q2TAL8 776 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 TKFCQ3LXA3 575 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 SNRNP48Q6IEG0 339 aaKnown RBP8.6□□□□□ -1.03
LINC01049-201ENST00000426840 Q6ZNB5 142 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 TMTC3Q6ZXV5 915 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 GPR142Q7Z601 462 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 CTU1Q7Z7A3 348 aaKnown RBP8.6□□□□□ -1.03
LINC01049-201ENST00000426840 NCAPG2Q86XI2 1143 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 CMTR1Q8N1G2 835 aaKnown RBP8.6□□□□□ -1.03
LINC01049-201ENST00000426840 PIGSQ96S52 555 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 LZTS2Q9BRK4 669 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 SPZ1Q9BXG8 430 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 MROH8Q9H579 483 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 RBM28Q9NW13 759 aaKnown RBP8.6□□□□□ -1.03
LINC01049-201ENST00000426840 PKD2L1Q9P0L9 805 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 SRRDQ9UH36 339 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 TPCN1Q9ULQ1 816 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 PTPN22Q9Y2R2 807 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 TRIM17Q9Y577 477 aa8.6□□□□□ -1.03
LINC01049-201ENST00000426840 CTDP1Q9Y5B0 961 aaPredicted RBP8.6□□□□□ -1.03
LINC01049-201ENST00000426840 ZNFX1Q9P2E3 1918 aaKnown RBP8.6□□□□□ -1.03
LINC01049-201ENST00000426840 NID2Q14112 1375 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms