RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 LETM2Q2VYF4 491 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 GRIPAP1Q4V328 841 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 SLFN13Q68D06 897 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 NOSTRINQ8IVI9 506 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 RSRC1Q96IZ7 334 aaKnown RBP17.7■□□□□ 0.42
PKP4-205ENST00000426248 CDK5RAP3Q96JB5 506 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 ARHGEF10LQ9HCE6 1279 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 EAPPQ56P03 285 aaPredicted RBP17.7■□□□□ 0.42
PKP4-205ENST00000426248 NKX2-3Q8TAU0 364 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 ANAPC4Q9UJX5 808 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 NUP188Q5SRE5 1749 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 USP17L5A8MUK1 530 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 KIF23Q02241 960 aaPredicted RBP17.7■□□□□ 0.42
PKP4-205ENST00000426248 TNFAIP1Q13829 316 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 PRAMEF18Q5VWM3 479 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 ADALQ6DHV7 355 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 ZFPM1Q8IX07 1006 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 ZNF408Q9H9D4 720 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 TCEAL9Q9UHQ7 104 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 MYO3BQ8WXR4 1341 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 ENO4A6NNW6 628 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 KCNV1Q6PIU1 500 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 ACRBPQ8NEB7 543 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 BAIAP2L1Q9UHR4 511 aa17.7■□□□□ 0.42
PKP4-205ENST00000426248 THSD7AQ9UPZ6 1657 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 RPS6KA5O75582 802 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 PFKFB1P16118 471 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 KCND1Q9NSA2 647 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 RNF181Q9P0P0 153 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 NHSQ6T4R5 1651 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 PPFIA1Q13136 1202 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 RILPL1Q5EBL4 403 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 FOXP4Q8IVH2 680 aaPredicted RBP17.69■□□□□ 0.42
PKP4-205ENST00000426248 CEP120Q8N960 986 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 COL1A1P02452 1464 aaPredicted RBP17.69■□□□□ 0.42
PKP4-205ENST00000426248 GCFC2P16383 781 aaKnown RBP17.69■□□□□ 0.42
PKP4-205ENST00000426248 DNA2P51530 1060 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 ODF2Q5BJF6 829 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 APOBEC3HQ6NTF7 200 aaKnown RBP17.69■□□□□ 0.42
PKP4-205ENST00000426248 TMTC3Q6ZXV5 915 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 KIAA1328Q86T90 577 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 MICALL2Q8IY33 904 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 NEDD1Q8NHV4 660 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 PIGSQ96S52 555 aa17.69■□□□□ 0.42
PKP4-205ENST00000426248 GNA11P29992 359 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 RHBDL3P58872 404 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 SNCBQ16143 134 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 FMR1NBQ8N0W7 255 aaPredicted RBP17.68■□□□□ 0.42
PKP4-205ENST00000426248 CPXCR1Q8N123 301 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 SLF1Q9BQI6 1058 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 KANSL2Q9H9L4 492 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 KLC4Q9NSK0 619 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 CNOT7Q9UIV1 285 aaKnown RBP17.68■□□□□ 0.42
PKP4-205ENST00000426248 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 CPP00450 1065 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 CCDC40Q4G0X9 1142 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 HNRNPLLQ8WVV9 542 aaKnown RBP17.68■□□□□ 0.42
PKP4-205ENST00000426248 TMEM39BQ9GZU3 492 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 SERPINA10Q9UK55 444 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 MYO6Q9UM54 1294 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 DDTLA6NHG4 134 aaPredicted RBP17.68■□□□□ 0.42
PKP4-205ENST00000426248 HSF2BPO75031 334 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 TUBBP07437 444 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 HPDP32754 393 aaPredicted RBP17.68■□□□□ 0.42
PKP4-205ENST00000426248 SNAP25P60880 206 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 KIFC2Q96AC6 838 aa17.68■□□□□ 0.42
PKP4-205ENST00000426248 BIN2Q9UBW5 565 aaPredicted RBP17.68■□□□□ 0.42
PKP4-205ENST00000426248 SRBD1Q8N5C6 995 aaKnown RBP17.67■□□□□ 0.42
PKP4-205ENST00000426248 ZDHHC15Q96MV8 337 aa17.67■□□□□ 0.42
PKP4-205ENST00000426248 PLIN2Q99541 437 aa17.67■□□□□ 0.42
PKP4-205ENST00000426248 GMPSP49915 693 aaPredicted RBP17.67■□□□□ 0.42
PKP4-205ENST00000426248 C16orf86Q6ZW13 317 aa17.67■□□□□ 0.42
PKP4-205ENST00000426248 COA7Q96BR5 231 aa17.67■□□□□ 0.42
PKP4-205ENST00000426248 SPDL1Q96EA4 605 aa17.67■□□□□ 0.42
PKP4-205ENST00000426248 WDR78Q5VTH9 848 aa17.67■□□□□ 0.42
PKP4-205ENST00000426248 CCDC84Q86UT8 332 aaPredicted RBP17.67■□□□□ 0.42
PKP4-205ENST00000426248 AGXT2Q9BYV1 514 aa17.67■□□□□ 0.42
PKP4-205ENST00000426248 A0A0U1RQJ8 604 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 NBPF9Q3BBW0 867 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 CCDC181Q5TID7 509 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 OXER1Q8TDS5 423 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 CUL5Q93034 780 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 ZKSCAN4Q969J2 545 aaPredicted RBP17.66■□□□□ 0.42
PKP4-205ENST00000426248 ZNF70Q9UC06 446 aaPredicted RBP17.66■□□□□ 0.42
PKP4-205ENST00000426248 EIF4E1BA6NMX2 242 aaKnown RBP17.66■□□□□ 0.42
PKP4-205ENST00000426248 OPA1O60313 960 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 BUB1BO60566 1050 aaPredicted RBP17.66■□□□□ 0.42
PKP4-205ENST00000426248 EEF2P13639 858 aaKnown RBP17.66■□□□□ 0.42
PKP4-205ENST00000426248 UBA7P41226 1012 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 AFMP43652 599 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 SEMA3FQ13275 785 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 DPY19L2Q6NUT2 758 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 RASGRP2Q7LDG7 609 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.66■□□□□ 0.42
PKP4-205ENST00000426248 TANGO6Q9C0B7 1094 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 PPANQ9NQ55 473 aaKnown RBP17.66■□□□□ 0.42
PKP4-205ENST00000426248 RASA3Q14644 834 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 CCDC174Q6PII3 467 aa17.66■□□□□ 0.42
PKP4-205ENST00000426248 NLGN2Q8NFZ4 835 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms