RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 PFKFB2O60825 505 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 PPP1R11O60927 126 aaPredicted RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 HSPA1AP0DMV8 641 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 HSPA1BP0DMV9 641 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 CALM1P0DP23 149 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 CALM2P0DP24 149 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 CALM3P0DP25 149 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 HSPA8P11142 646 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 METAP2P50579 478 aaKnown RBP eCLIP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 STAT2P52630 851 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 SCRN1Q12765 414 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 NTRK3Q16288 839 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 RTN1Q16799 776 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 GPATCH4Q5T3I0 446 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 SYNE3Q6ZMZ3 975 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 FAM160B2Q86V87 743 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 CTCFLQ8NI51 663 aaPredicted RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 SMCR8Q8TEV9 937 aaPredicted RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 CHURC1Q8WUH1 139 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 SYMPKQ92797 1274 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 ZNF274Q96GC6 653 aaPredicted RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 PIGSQ96S52 555 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 MAP3K14Q99558 947 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 PORCNQ9H237 461 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 RANBP17Q9H2T7 1088 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 RIOX1Q9H6W3 641 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 RAVER2Q9HCJ3 691 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 SAGE1Q9NXZ1 904 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 MORF4L1Q9UBU8 362 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 ZNF214Q9UL59 606 aaPredicted RBP6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 RABGAP1Q9Y3P9 1069 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 RIPK3Q9Y572 518 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 MYPNQ86TC9 1320 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 NID2Q14112 1375 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 RLFQ13129 1914 aa6.64□□□□□ -1.35
HERPUD2-204ENST00000426180 DHX16O60231 1041 aaKnown RBP6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 ZBED4O75132 1171 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 CTDNEP1O95476 244 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 JUNDP17535 347 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 STAT3P40763 770 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 GCLCP48506 637 aaPredicted RBP6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 ERVK-9P63128 1117 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 ERVK-24P63145 666 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 GUCA2AQ02747 115 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 PLS1Q14651 629 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 ANKRD1Q15327 319 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 CDC37Q16543 378 aaPredicted RBP6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 QRICH1Q2TAL8 776 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 SNRNP48Q6IEG0 339 aaKnown RBP6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 HOMER1Q86YM7 354 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 CPXCR1Q8N123 301 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 GPRC5AQ8NFJ5 357 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 CD99L2Q8TCZ2 262 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 ZNF296Q8WUU4 475 aaPredicted RBP6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 CNTNAP5Q8WYK1 1306 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 PHKBQ93100 1093 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 SHISA4Q96DD7 197 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 MTMR8Q96EF0 704 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 SPZ1Q9BXG8 430 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 MOV10L1Q9BXT6 1211 aaKnown RBP6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 SPATC1LQ9H0A9 340 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 EFCC1Q9HA90 598 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 LIMCH1Q9UPQ0 1083 aa6.63□□□□□ -1.35
HERPUD2-204ENST00000426180 A0A0G2JMZ2 1700 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 ATP2A1O14983 1001 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 ADAMTS3O15072 1205 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 SIAH2O43255 324 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 JAK2O60674 1132 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 ERCC3P19447 782 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 KIF5BP33176 963 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 GNAQP50148 359 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 LBX1P52954 281 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 RCAN1P53805 252 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 LACTBP83111 547 aaPredicted RBP6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 PKN1Q16512 942 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 FAM110CQ1W6H9 321 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 USH1GQ495M9 461 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 MUM1L1Q5H9M0 696 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 PTCRAQ6ISU1 281 aaPredicted RBP6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 CCDC83Q8IWF9 413 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 MB21D1Q8N884 522 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 EHBP1Q8NDI1 1231 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 GTF3C2Q8WUA4 911 aaPredicted RBP6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 GPKOWQ92917 476 aaPredicted RBP eCLIP6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 GTF3C6Q969F1 213 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 COA7Q96BR5 231 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 TMX3Q96JJ7 454 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 NUDT12Q9BQG2 462 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 LZTS2Q9BRK4 669 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 BEGAINQ9BUH8 593 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 SLKQ9H2G2 1235 aaPredicted RBP6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 HOMER2Q9NSB8 354 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 RBM28Q9NW13 759 aaKnown RBP6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 CCPG1Q9ULG6 757 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 WASF2Q9Y6W5 498 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 PARP14Q460N5 1801 aa6.62□□□□□ -1.35
HERPUD2-204ENST00000426180 PNMA6FA0A0J9YX94 578 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 NFIBO00712 420 aa6.61□□□□□ -1.35
HERPUD2-204ENST00000426180 OPLAHO14841 1288 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms