RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 ZSCAN31Q96LW9 406 aaPredicted RBP8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 AGBL1Q96MI9 1066 aa8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PIGSQ96S52 555 aa8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PAGR1Q9BTK6 254 aa8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 BEGAINQ9BUH8 593 aa8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 MOV10L1Q9BXT6 1211 aaKnown RBP8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PORCNQ9H237 461 aa8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SLKQ9H2G2 1235 aaPredicted RBP8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 RAVER2Q9HCJ3 691 aaKnown RBP8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 VAT1LQ9HCJ6 419 aa8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 NAP1L2Q9ULW6 460 aaPredicted RBP8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 RIPK3Q9Y572 518 aa8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CNTNAP5Q8WYK1 1306 aa8.19□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PNMA6FA0A0J9YX94 578 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 ZBTB5O15062 677 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PRPF3O43395 683 aaKnown RBP8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 FMNL1O95466 1100 aaPredicted RBP8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 HSPA8P11142 646 aaKnown RBP8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 STAT3P40763 770 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 MCM2P49736 904 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SP3Q02447 781 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PKN1Q16512 942 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 NSUN7Q8NE18 718 aaKnown RBP8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SHCBP1Q8NEM2 672 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 ZNF296Q8WUU4 475 aaPredicted RBP8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SPIRE2Q8WWL2 714 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SNX21Q969T3 373 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 TMX3Q96JJ7 454 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 TEX13BQ9BXU2 312 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 EFCC1Q9HA90 598 aa8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SH2B1Q9NRF2 756 aaPredicted RBP8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 ISY1Q9ULR0 285 aaKnown RBP8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 V9GY48 417 aaPredicted RBP8.18□□□□□ -1.1
CHCHD3P1-201ENST00000425516 COL11A1P12107 1806 aaPredicted RBP8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 hCG_1642624A0A1W2PR95 340 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 MOXD2PA6NHM9 499 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 OPLAHO14841 1288 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 DTNBO60941 627 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 FKTNO75072 461 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SLC25A27O95847 323 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 FDPSP14324 419 aaKnown RBP8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 TAL1P17542 331 aaPredicted RBP8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 ERCC3P19447 782 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 GGCXP38435 758 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 LACTBP83111 547 aaPredicted RBP8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PDE4DQ08499 809 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CUL4AQ13619 759 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CDC37Q16543 378 aaPredicted RBP8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 MUM1L1Q5H9M0 696 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SNRNP48Q6IEG0 339 aaKnown RBP8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CCDC174Q6PII3 467 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 FBXO11Q86XK2 927 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CPXCR1Q8N123 301 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SMARCC2Q8TAQ2 1214 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CLEC4DQ8WXI8 215 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 USP6NLQ92738 828 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PHKBQ93100 1093 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SHISA4Q96DD7 197 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 RRP36Q96EU6 259 aaKnown RBP8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 TRIM47Q96LD4 638 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 RNF26Q9BY78 433 aaPredicted RBP8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 ARHGAP39Q9C0H5 1083 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 GJD2Q9UKL4 321 aa8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 FCF1Q9Y324 198 aaKnown RBP8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 BAZ2BQ9UIF8 2168 aaKnown RBP8.17□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SMCHD1A6NHR9 2005 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 DHX16O60231 1041 aaKnown RBP8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PPFIA3O75145 1194 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 ALAS1P13196 640 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 MAPK4P31152 587 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 COPB2P35606 906 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SLC19A1P41440 591 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PSMC4P43686 418 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CTCFP49711 727 aaPredicted RBP8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CCNA1P78396 465 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 GHRHRQ02643 423 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SSRP1Q08945 709 aaKnown RBP8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PLS1Q14651 629 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PFKFB3Q16875 520 aaPredicted RBP8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 TKFCQ3LXA3 575 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 HOMER1Q86YM7 354 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CCDC83Q8IWF9 413 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 ABRAQ8N0Z2 381 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 RGS22Q8NE09 1264 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CHST13Q8NET6 341 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CD99L2Q8TCZ2 262 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PIBF1Q8WXW3 757 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 COA7Q96BR5 231 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 TRERF1Q96PN7 1200 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 LLPHQ9BRT6 129 aaKnown RBP8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 AMNQ9BXJ7 453 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 MAF1Q9H063 256 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 MROH8Q9H579 483 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PNMA2Q9UL42 364 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 CCPG1Q9ULG6 757 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 PCDHA1Q9Y5I3 950 aa8.16□□□□□ -1.1
CHCHD3P1-201ENST00000425516 ABCB11O95342 1321 aa8.15□□□□□ -1.1
CHCHD3P1-201ENST00000425516 STK36Q9NRP7 1315 aa8.15□□□□□ -1.1
CHCHD3P1-201ENST00000425516 DNAJC25-GNG10A0A024R161 153 aa8.15□□□□□ -1.1
CHCHD3P1-201ENST00000425516 SLC15A5A6NIM6 579 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms