RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 IL23AQ9NPF7 189 aa18.86■□□□□ 0.61
DDR1-234ENST00000424544 POLR3EQ9NVU0 708 aa18.86■□□□□ 0.61
DDR1-234ENST00000424544 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
DDR1-234ENST00000424544 UMODL1Q5DID0 1318 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 B4DLN1 442 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 SGSM2O43147 1006 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 ARIH2O95376 493 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 CPT1AP50416 773 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 MRPL12P52815 198 aaKnown RBP18.85■□□□□ 0.61
DDR1-234ENST00000424544 IFIT1BQ5T764 474 aaKnown RBP18.85■□□□□ 0.61
DDR1-234ENST00000424544 ZNF365Q70YC5 407 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 MCF2L2Q86YR7 1114 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 NSUN6Q8TEA1 469 aaKnown RBP18.85■□□□□ 0.61
DDR1-234ENST00000424544 RUFY2Q8WXA3 655 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 COPS5Q92905 334 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 IWS1Q96ST2 819 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 MPHOSPH6Q99547 160 aaKnown RBP18.85■□□□□ 0.61
DDR1-234ENST00000424544 UBAC1Q9BSL1 405 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 VAT1LQ9HCJ6 419 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 MRPL11Q9Y3B7 192 aaKnown RBP18.85■□□□□ 0.61
DDR1-234ENST00000424544 TAF6LQ9Y6J9 622 aa18.85■□□□□ 0.61
DDR1-234ENST00000424544 U3KPZ7 1027 aaPredicted RBP18.85■□□□□ 0.61
DDR1-234ENST00000424544 SCN10AQ9Y5Y9 1956 aa18.84■□□□□ 0.61
DDR1-234ENST00000424544 FBXO11Q86XK2 927 aa18.84■□□□□ 0.61
DDR1-234ENST00000424544 HERVK_113Q902F9 699 aa18.84■□□□□ 0.61
DDR1-234ENST00000424544 MAP4K1Q92918 833 aa18.84■□□□□ 0.61
DDR1-234ENST00000424544 MTG1Q9BT17 334 aaPredicted RBP18.84■□□□□ 0.61
DDR1-234ENST00000424544 WNT8AQ9H1J5 351 aa18.84■□□□□ 0.61
DDR1-234ENST00000424544 HIPK3Q9H422 1215 aa18.84■□□□□ 0.61
DDR1-234ENST00000424544 CUL9Q8IWT3 2517 aa18.83■□□□□ 0.61
DDR1-234ENST00000424544 KLRF2D3W0D1 207 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 KPNA6O60684 536 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 PPP1R11O60927 126 aaPredicted RBP18.83■□□□□ 0.6
DDR1-234ENST00000424544 ACRP10323 421 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 TXNP10599 105 aaKnown RBP18.83■□□□□ 0.6
DDR1-234ENST00000424544 HSD17B4P51659 736 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 TROAPQ12815 778 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 TTLL4Q14679 1199 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 PPP2R5BQ15173 497 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 BMP2KLQ5H9B9 411 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 OR6J1Q8NGC5 347 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 AMNQ9BXJ7 453 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 RIOX1Q9H6W3 641 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 SENP2Q9HC62 589 aa18.83■□□□□ 0.6
DDR1-234ENST00000424544 MAP3K20Q9NYL2 800 aaKnown RBP18.83■□□□□ 0.6
DDR1-234ENST00000424544 CHD9Q3L8U1 2897 aa18.82■□□□□ 0.6
DDR1-234ENST00000424544 ZBTB5O15062 677 aa18.82■□□□□ 0.6
DDR1-234ENST00000424544 PSRC1Q6PGN9 363 aaPredicted RBP18.82■□□□□ 0.6
DDR1-234ENST00000424544 STOX1Q6ZVD7 989 aa18.82■□□□□ 0.6
DDR1-234ENST00000424544 IGDCC4Q8TDY8 1250 aa18.82■□□□□ 0.6
DDR1-234ENST00000424544 RMDN3Q96TC7 470 aa18.82■□□□□ 0.6
DDR1-234ENST00000424544 TRMT13Q9NUP7 481 aaKnown RBP18.82■□□□□ 0.6
DDR1-234ENST00000424544 CXXC1Q9P0U4 656 aaPredicted RBP18.82■□□□□ 0.6
DDR1-234ENST00000424544 DDX41Q9UJV9 622 aaKnown RBP18.82■□□□□ 0.6
DDR1-234ENST00000424544 GRXCR1A8MXD5 290 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 E7EWF7 191 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 DLL1O00548 723 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 CYTH3O43739 400 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 MYL3P08590 195 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 DNAJB2P25686 324 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 ARHGAP1Q07960 439 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 TRDNQ13061 729 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 GRM4Q14833 912 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 STXBP2Q15833 593 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 NBPF20Q3BBV1 942 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 NFRKBQ6P4R8 1299 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 SAMD3Q8N6K7 520 aa18.81■□□□□ 0.6
DDR1-234ENST00000424544 EIF3JO75822 258 aaKnown RBP18.8■□□□□ 0.6
DDR1-234ENST00000424544 FGBP02675 491 aa18.8■□□□□ 0.6
DDR1-234ENST00000424544 SUPT20HL2P0C7V6 817 aa18.8■□□□□ 0.6
DDR1-234ENST00000424544 ANTXR2P58335 489 aa18.8■□□□□ 0.6
DDR1-234ENST00000424544 PTPN11Q06124 597 aaPredicted RBP18.8■□□□□ 0.6
DDR1-234ENST00000424544 GRIN2CQ14957 1233 aa18.8■□□□□ 0.6
DDR1-234ENST00000424544 BRDTQ58F21 947 aaPredicted RBP18.8■□□□□ 0.6
DDR1-234ENST00000424544 MYLIPQ8WY64 445 aa18.8■□□□□ 0.6
DDR1-234ENST00000424544 EMID1Q96A84 441 aaPredicted RBP18.8■□□□□ 0.6
DDR1-234ENST00000424544 PBX4Q9BYU1 374 aa18.8■□□□□ 0.6
DDR1-234ENST00000424544 BAZ2BQ9UIF8 2168 aaKnown RBP18.79■□□□□ 0.6
DDR1-234ENST00000424544 SPTBN5Q9NRC6 3674 aaKnown RBP18.79■□□□□ 0.6
DDR1-234ENST00000424544 RGS20O76081 388 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 NR3C2P08235 984 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 PBX2P40425 430 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 CCL23P55773 120 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 LY6KQ17RY6 165 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 SEPT14Q6ZU15 432 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 VSIG10LQ86VR7 867 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 MB21D2Q8IYB1 491 aaPredicted RBP18.79■□□□□ 0.6
DDR1-234ENST00000424544 NCOA7Q8NI08 942 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 KAT2BQ92831 832 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 CTAGE1Q96RT6 745 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 ZNF576Q9H609 170 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 GPHNQ9NQX3 736 aaPredicted RBP18.79■□□□□ 0.6
DDR1-234ENST00000424544 PXMP2Q9NR77 195 aa18.79■□□□□ 0.6
DDR1-234ENST00000424544 MYH6P13533 1939 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 IFIT3O14879 490 aaKnown RBP18.78■□□□□ 0.6
DDR1-234ENST00000424544 DHX16O60231 1041 aaKnown RBP18.78■□□□□ 0.6
DDR1-234ENST00000424544 CFBP00751 764 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 CYP2C9P11712 490 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 SESTD1Q86VW0 696 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 RPUSD2Q8IZ73 545 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms