RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 ZFPM2Q8WW38 1151 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 DHTKD1Q96HY7 919 aaPredicted RBP9.5□□□□□ -0.89
VPS8-204ENST00000424463 UBAC1Q9BSL1 405 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 SLC26A6Q9BXS9 759 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 CRNKL1Q9BZJ0 848 aaKnown RBP9.5□□□□□ -0.89
VPS8-204ENST00000424463 HOMER3Q9NSC5 361 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 RGL1Q9NZL6 768 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 RCOR1Q9UKL0 485 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 WDR37Q9Y2I8 494 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 ERICH2A1L162 156 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 KLRG2A4D1S0 409 aaPredicted RBP9.5□□□□□ -0.89
VPS8-204ENST00000424463 TBKBP1A7MCY6 615 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 RIMBP2O15034 1052 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 NMT2O60551 498 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 RBP3P10745 1247 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 ATP2B4P23634 1241 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 RXRBP28702 533 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 USP8P40818 1118 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 IARSP41252 1262 aaKnown RBP9.5□□□□□ -0.89
VPS8-204ENST00000424463 IGBP1P78318 339 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 PABPC4Q13310 644 aaKnown RBP eCLIP9.5□□□□□ -0.89
VPS8-204ENST00000424463 SEC23AQ15436 765 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 FAM47AQ5JRC9 791 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 ALKBH2Q6NS38 261 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 FAM76AQ8TAV0 307 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 BICD2Q8TD16 824 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 ESR2Q92731 530 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 RNPC3Q96LT9 517 aaKnown RBP9.5□□□□□ -0.89
VPS8-204ENST00000424463 OSBPL10Q9BXB5 764 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 ZNF304Q9HCX3 659 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 CLIC4Q9Y696 253 aa9.5□□□□□ -0.89
VPS8-204ENST00000424463 TNKSO95271 1327 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 CARNS1A5YM72 827 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 MMP10P09238 476 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 GCKP35557 465 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 BTG3Q14201 252 aaPredicted RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 MYBPC3Q14896 1274 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 RCN1Q15293 331 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 CCDC93Q567U6 631 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 KRT40Q6A162 431 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 C15orf52Q6ZUT6 534 aaKnown RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 CKAP2LQ8IYA6 745 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 NLGN1Q8N2Q7 840 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 ENAHQ8N8S7 591 aaPredicted RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 N4BP2L2Q92802 583 aaPredicted RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 CRAMP1Q96RY5 1269 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 ZSCAN10Q96SZ4 725 aaPredicted RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 C2orf49Q9BVC5 232 aaPredicted RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 XPO4Q9C0E2 1151 aaKnown RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 MCM9Q9NXL9 1143 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 SPDYE3A6NKU9 549 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 SLC26A4O43511 780 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 CYP1A2P05177 515 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 TRIM21P19474 475 aaKnown RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 KIF23Q02241 960 aaPredicted RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 SSRP1Q08945 709 aaKnown RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 DHX8Q14562 1220 aaKnown RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 CCDC144BQ3MJ40 725 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 C10orf62Q5T681 223 aaPredicted RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 LMBRD2Q68DH5 695 aaPredicted RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 TMEM151BQ8IW70 566 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 ZNF654Q8IZM8 581 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 FANCBQ8NB91 859 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 CDK5RAP3Q96JB5 506 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 UIMC1Q96RL1 719 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 VPS33BQ9H267 617 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 GOLPH3LQ9H4A5 285 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 ATP8A2Q9NTI2 1148 aa9.49□□□□□ -0.89
VPS8-204ENST00000424463 DNAAF2Q9NVR5 837 aaKnown RBP9.49□□□□□ -0.89
VPS8-204ENST00000424463 PPEF1O14829 653 aaPredicted RBP9.48□□□□□ -0.89
VPS8-204ENST00000424463 FGRP09769 529 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 SRGNP10124 158 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 BTF3P20290 206 aaKnown RBP9.48□□□□□ -0.89
VPS8-204ENST00000424463 ERCC5P28715 1186 aaPredicted RBP9.48□□□□□ -0.89
VPS8-204ENST00000424463 INHBCP55103 352 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 SH3BGRP55822 239 aaPredicted RBP9.48□□□□□ -0.89
VPS8-204ENST00000424463 SIM2Q14190 667 aaPredicted RBP9.48□□□□□ -0.89
VPS8-204ENST00000424463 RTN1Q16799 776 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 APPL2Q8NEU8 664 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 LILRB1Q8NHL6 650 aaPredicted RBP9.48□□□□□ -0.89
VPS8-204ENST00000424463 MIPOL1Q8TD10 442 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 TGFBRAP1Q8WUH2 860 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 DDX12PQ92771 950 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 DYNLL2Q96FJ2 89 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 FUCA2Q9BTY2 467 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 TBK1Q9UHD2 729 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 ZNF510Q9Y2H8 683 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 hCG_1642624A0A1W2PR95 340 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 TMEM221A6NGB7 291 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 FOXD2O60548 495 aaPredicted RBP9.48□□□□□ -0.89
VPS8-204ENST00000424463 VIL1P09327 827 aaKnown RBP9.48□□□□□ -0.89
VPS8-204ENST00000424463 IL1R1P14778 569 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 MAN1A1P33908 653 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 MATR3P43243 847 aaKnown RBP eCLIP9.48□□□□□ -0.89
VPS8-204ENST00000424463 USP5P45974 858 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 ME1P48163 572 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 TEX35Q5T0J7 233 aa9.48□□□□□ -0.89
VPS8-204ENST00000424463 CCAR1Q8IX12 1150 aaKnown RBP9.48□□□□□ -0.89
VPS8-204ENST00000424463 ZNF397Q8NF99 534 aaPredicted RBP9.48□□□□□ -0.89
VPS8-204ENST00000424463 UROC1Q96N76 676 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms