RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 LIMCH1Q9UPQ0 1083 aa21.27■■□□□ 1
HDAC6-205ENST00000423941 KIAA1217Q5T5P2 1943 aa21.27■■□□□ 1
HDAC6-205ENST00000423941 RBM47A0AV96 593 aaKnown RBP21.26■□□□□ 0.99
HDAC6-205ENST00000423941 CTDNEP1O95476 244 aa21.26■□□□□ 0.99
HDAC6-205ENST00000423941 MNX1P50219 401 aaPredicted RBP21.26■□□□□ 0.99
HDAC6-205ENST00000423941 HEATR3Q7Z4Q2 680 aa21.26■□□□□ 0.99
HDAC6-205ENST00000423941 VTA1Q9NP79 307 aa21.26■□□□□ 0.99
HDAC6-205ENST00000423941 ESYT2A0FGR8 921 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 B4DLN1 442 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 CPLX1O14810 134 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 AKR1A1P14550 325 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 CNGA1P29973 690 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 MRPL12P52815 198 aaKnown RBP21.25■□□□□ 0.99
HDAC6-205ENST00000423941 ST3GAL1Q11201 340 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 CPLX2Q6PUV4 134 aaKnown RBP21.25■□□□□ 0.99
HDAC6-205ENST00000423941 USP17L6PQ6QN14 398 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 GTF3C6Q969F1 213 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 PDCD2LQ9BRP1 358 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 SLC26A6Q9BXS9 759 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 ZMYND12Q9H0C1 365 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 RIC8AQ9NPQ8 531 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 FAM184BQ9ULE4 1060 aa21.25■□□□□ 0.99
HDAC6-205ENST00000423941 MKI67P46013 3256 aaKnown RBP21.24■□□□□ 0.99
HDAC6-205ENST00000423941 ADCY6O43306 1168 aa21.24■□□□□ 0.99
HDAC6-205ENST00000423941 NR3C2P08235 984 aa21.24■□□□□ 0.99
HDAC6-205ENST00000423941 NKX3-2P78367 333 aa21.24■□□□□ 0.99
HDAC6-205ENST00000423941 SSRP1Q08945 709 aaKnown RBP21.24■□□□□ 0.99
HDAC6-205ENST00000423941 CCDC144BQ3MJ40 725 aa21.24■□□□□ 0.99
HDAC6-205ENST00000423941 IQSEC1Q6DN90 963 aa21.24■□□□□ 0.99
HDAC6-205ENST00000423941 VSIG10LQ86VR7 867 aa21.24■□□□□ 0.99
HDAC6-205ENST00000423941 ANKLE1Q8NAG6 615 aa21.24■□□□□ 0.99
HDAC6-205ENST00000423941 MPHOSPH6Q99547 160 aaKnown RBP21.24■□□□□ 0.99
HDAC6-205ENST00000423941 SH3GLB2Q9NR46 395 aa21.24■□□□□ 0.99
HDAC6-205ENST00000423941 DUSP11O75319 330 aaKnown RBP21.23■□□□□ 0.99
HDAC6-205ENST00000423941 DEXIO95424 95 aa21.23■□□□□ 0.99
HDAC6-205ENST00000423941 TFRCP02786 760 aaKnown RBP21.23■□□□□ 0.99
HDAC6-205ENST00000423941 CLK2P49760 499 aaKnown RBP21.23■□□□□ 0.99
HDAC6-205ENST00000423941 NAPAP54920 295 aa21.23■□□□□ 0.99
HDAC6-205ENST00000423941 AKAP17AQ02040 695 aaKnown RBP21.23■□□□□ 0.99
HDAC6-205ENST00000423941 ARHGEF16Q5VV41 709 aa21.23■□□□□ 0.99
HDAC6-205ENST00000423941 TRIM22Q8IYM9 498 aa21.23■□□□□ 0.99
HDAC6-205ENST00000423941 FAM177A1Q8N128 213 aaPredicted RBP21.23■□□□□ 0.99
HDAC6-205ENST00000423941 NECAB1Q8N987 351 aa21.23■□□□□ 0.99
HDAC6-205ENST00000423941 CUL5Q93034 780 aa21.23■□□□□ 0.99
HDAC6-205ENST00000423941 ZSCAN31Q96LW9 406 aaPredicted RBP21.23■□□□□ 0.99
HDAC6-205ENST00000423941 PDGFCQ9NRA1 345 aa21.23■□□□□ 0.99
HDAC6-205ENST00000423941 STK36Q9NRP7 1315 aa21.23■□□□□ 0.99
HDAC6-205ENST00000423941 SMCO2A6NFE2 343 aa21.22■□□□□ 0.99
HDAC6-205ENST00000423941 CAPN15O75808 1086 aa21.22■□□□□ 0.99
HDAC6-205ENST00000423941 CDKL5O76039 1030 aa21.22■□□□□ 0.99
HDAC6-205ENST00000423941 PDE4DQ08499 809 aa21.22■□□□□ 0.99
HDAC6-205ENST00000423941 PGM5Q15124 567 aa21.22■□□□□ 0.99
HDAC6-205ENST00000423941 STXBP2Q15833 593 aa21.22■□□□□ 0.99
HDAC6-205ENST00000423941 FCHSD1Q86WN1 690 aa21.22■□□□□ 0.99
HDAC6-205ENST00000423941 GLT8D2Q9H1C3 349 aa21.22■□□□□ 0.99
HDAC6-205ENST00000423941 ZHX1Q9UKY1 873 aaPredicted RBP21.22■□□□□ 0.99
HDAC6-205ENST00000423941 GNEQ9Y223 722 aaKnown RBP21.22■□□□□ 0.99
HDAC6-205ENST00000423941 PPFIA3O75145 1194 aa21.21■□□□□ 0.99
HDAC6-205ENST00000423941 EIF3JO75822 258 aaKnown RBP21.21■□□□□ 0.99
HDAC6-205ENST00000423941 FDPSP14324 419 aaKnown RBP21.21■□□□□ 0.99
HDAC6-205ENST00000423941 EIF2AK2P19525 551 aaKnown RBP21.21■□□□□ 0.99
HDAC6-205ENST00000423941 NOL8Q76FK4 1167 aaKnown RBP21.21■□□□□ 0.99
HDAC6-205ENST00000423941 FBXO16Q8IX29 292 aaPredicted RBP21.21■□□□□ 0.99
HDAC6-205ENST00000423941 IL31RAQ8NI17 732 aa21.21■□□□□ 0.99
HDAC6-205ENST00000423941 SMARCC2Q8TAQ2 1214 aa21.21■□□□□ 0.99
HDAC6-205ENST00000423941 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.2■□□□□ 0.98
HDAC6-205ENST00000423941 ADAMTS4O75173 837 aa21.2■□□□□ 0.98
HDAC6-205ENST00000423941 RGS20O76081 388 aa21.2■□□□□ 0.98
HDAC6-205ENST00000423941 RARBP10826 455 aa21.2■□□□□ 0.98
HDAC6-205ENST00000423941 ADCYAP1R1P41586 468 aa21.2■□□□□ 0.98
HDAC6-205ENST00000423941 MRPS9P82933 396 aaKnown RBP21.2■□□□□ 0.98
HDAC6-205ENST00000423941 UBE2SQ16763 222 aa21.2■□□□□ 0.98
HDAC6-205ENST00000423941 ANO1Q5XXA6 986 aa21.2■□□□□ 0.98
HDAC6-205ENST00000423941 CCDC62Q6P9F0 684 aa21.2■□□□□ 0.98
HDAC6-205ENST00000423941 EEPD1Q7L9B9 569 aa21.2■□□□□ 0.98
HDAC6-205ENST00000423941 NSUN7Q8NE18 718 aaKnown RBP21.2■□□□□ 0.98
HDAC6-205ENST00000423941 CCDC12Q8WUD4 166 aaPredicted RBP21.2■□□□□ 0.98
HDAC6-205ENST00000423941 UPF3AQ9H1J1 476 aaKnown RBP21.2■□□□□ 0.98
HDAC6-205ENST00000423941 SH2B1Q9NRF2 756 aaPredicted RBP21.2■□□□□ 0.98
HDAC6-205ENST00000423941 Q9Y3F1 56 aa21.2■□□□□ 0.98
HDAC6-205ENST00000423941 TNRC18O15417 2968 aaPredicted RBP21.19■□□□□ 0.98
HDAC6-205ENST00000423941 ADAMTS3O15072 1205 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 CTAGE5O15320 804 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 ST18O60284 1047 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 CD2BP2O95400 341 aaKnown RBP21.19■□□□□ 0.98
HDAC6-205ENST00000423941 FOSP01100 380 aaPredicted RBP21.19■□□□□ 0.98
HDAC6-205ENST00000423941 SMPD1P17405 629 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 ADCY7P51828 1080 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 TNFAIP2Q03169 654 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 DUSP28Q4G0W2 176 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 TMEM63BQ5T3F8 832 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 CCSAPQ6IQ19 270 aaPredicted RBP21.19■□□□□ 0.98
HDAC6-205ENST00000423941 XRRA1Q6P2D8 792 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 KLHDC9Q8NEP7 349 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 PCDHA6Q9UN73 950 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 PCDHA8Q9Y5H6 950 aa21.19■□□□□ 0.98
HDAC6-205ENST00000423941 STAM2O75886 525 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 COL6A1P12109 1028 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 GJA9P57773 515 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 NPY5RQ15761 445 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms