RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 FBXO18Q8NFZ0 1043 aa19.48■□□□□ 0.71
COL7A1-202ENST00000422991 RAET1EQ8TD07 263 aa19.48■□□□□ 0.71
COL7A1-202ENST00000422991 TAAR1Q96RJ0 339 aa19.48■□□□□ 0.71
COL7A1-202ENST00000422991 ADD3Q9UEY8 706 aaKnown RBP19.48■□□□□ 0.71
COL7A1-202ENST00000422991 PTPN22Q9Y2R2 807 aa19.48■□□□□ 0.71
COL7A1-202ENST00000422991 PTCH2Q9Y6C5 1203 aa19.48■□□□□ 0.71
COL7A1-202ENST00000422991 RPTORQ8N122 1335 aa19.48■□□□□ 0.71
COL7A1-202ENST00000422991 M0R2N6 131 aa19.47■□□□□ 0.71
COL7A1-202ENST00000422991 IGHA2P01877 340 aa19.47■□□□□ 0.71
COL7A1-202ENST00000422991 RGS19P49795 217 aa19.47■□□□□ 0.71
COL7A1-202ENST00000422991 ALDH5A1P51649 535 aaPredicted RBP19.47■□□□□ 0.71
COL7A1-202ENST00000422991 AP3B2Q13367 1082 aa19.47■□□□□ 0.71
COL7A1-202ENST00000422991 OLFML2BQ68BL8 750 aa19.47■□□□□ 0.71
COL7A1-202ENST00000422991 TRMT44Q8IYL2 757 aaKnown RBP19.47■□□□□ 0.71
COL7A1-202ENST00000422991 RMDN3Q96TC7 470 aa19.47■□□□□ 0.71
COL7A1-202ENST00000422991 PXMP2Q9NR77 195 aa19.47■□□□□ 0.71
COL7A1-202ENST00000422991 TMEM260Q9NX78 707 aa19.47■□□□□ 0.71
COL7A1-202ENST00000422991 FLRT1Q9NZU1 646 aa19.47■□□□□ 0.71
COL7A1-202ENST00000422991 BIN2Q9UBW5 565 aaPredicted RBP19.47■□□□□ 0.71
COL7A1-202ENST00000422991 LOC102724159A0A0B4J2E5 919 aa19.46■□□□□ 0.71
COL7A1-202ENST00000422991 ADCY3O60266 1144 aa19.46■□□□□ 0.71
COL7A1-202ENST00000422991 FOSP01100 380 aaPredicted RBP19.46■□□□□ 0.71
COL7A1-202ENST00000422991 GUCY1B3Q02153 619 aa19.46■□□□□ 0.71
COL7A1-202ENST00000422991 PWP2Q15269 919 aaKnown RBP19.46■□□□□ 0.71
COL7A1-202ENST00000422991 MAMDC4Q6UXC1 1216 aa19.46■□□□□ 0.71
COL7A1-202ENST00000422991 MSL3Q8N5Y2 521 aaKnown RBP19.46■□□□□ 0.71
COL7A1-202ENST00000422991 RASGRP4Q8TDF6 673 aa19.46■□□□□ 0.71
COL7A1-202ENST00000422991 NSUN6Q8TEA1 469 aaKnown RBP19.46■□□□□ 0.71
COL7A1-202ENST00000422991 TRIB2Q92519 343 aa19.46■□□□□ 0.71
COL7A1-202ENST00000422991 MYH7BA7E2Y1 1941 aa19.46■□□□□ 0.71
COL7A1-202ENST00000422991 SPDYE3A6NKU9 549 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 ELNP15502 786 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 EDNRBP24530 442 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 KRT2P35908 639 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 ARHGEF16Q5VV41 709 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 JAKMIP3Q5VZ66 844 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 MCTP2Q6DN12 878 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 SLAIN1Q8ND83 568 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 OXER1Q8TDS5 423 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 MORC4Q8TE76 937 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 PXYLP1Q8TE99 480 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 PDCD2LQ9BRP1 358 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 TINF2Q9BSI4 451 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 ANO3Q9BYT9 981 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 BRMS1Q9HCU9 246 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 PCDHA6Q9UN73 950 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 RBM19Q9Y4C8 960 aaKnown RBP19.45■□□□□ 0.7
COL7A1-202ENST00000422991 PCDHA8Q9Y5H6 950 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 DDX49Q9Y6V7 483 aaKnown RBP19.45■□□□□ 0.7
COL7A1-202ENST00000422991 SYNGAP1Q96PV0 1343 aa19.45■□□□□ 0.7
COL7A1-202ENST00000422991 ASB14A6NK59 587 aa19.44■□□□□ 0.7
COL7A1-202ENST00000422991 EIF2AK2P19525 551 aaKnown RBP19.44■□□□□ 0.7
COL7A1-202ENST00000422991 PDCP20941 246 aa19.44■□□□□ 0.7
COL7A1-202ENST00000422991 LARP1BQ659C4 914 aaKnown RBP19.44■□□□□ 0.7
COL7A1-202ENST00000422991 ARMCX2Q7L311 632 aa19.44■□□□□ 0.7
COL7A1-202ENST00000422991 DIS3L2Q8IYB7 885 aaKnown RBP19.44■□□□□ 0.7
COL7A1-202ENST00000422991 SPRYD3Q8NCJ5 442 aa19.44■□□□□ 0.7
COL7A1-202ENST00000422991 IL31RAQ8NI17 732 aa19.44■□□□□ 0.7
COL7A1-202ENST00000422991 TNFRSF25Q93038 417 aa19.44■□□□□ 0.7
COL7A1-202ENST00000422991 PGBD1Q96JS3 809 aa19.44■□□□□ 0.7
COL7A1-202ENST00000422991 IWS1Q96ST2 819 aa19.44■□□□□ 0.7
COL7A1-202ENST00000422991 CENPFP49454 3210 aa19.44■□□□□ 0.7
COL7A1-202ENST00000422991 KIAA1217Q5T5P2 1943 aa19.43■□□□□ 0.7
COL7A1-202ENST00000422991 HMGCRP04035 888 aa19.43■□□□□ 0.7
COL7A1-202ENST00000422991 GRK4P32298 578 aa19.43■□□□□ 0.7
COL7A1-202ENST00000422991 PGM5Q15124 567 aa19.43■□□□□ 0.7
COL7A1-202ENST00000422991 SAFBQ15424 915 aaKnown RBP eCLIP19.43■□□□□ 0.7
COL7A1-202ENST00000422991 MPHOSPH6Q99547 160 aaKnown RBP19.43■□□□□ 0.7
COL7A1-202ENST00000422991 EHMT1Q9H9B1 1298 aa19.43■□□□□ 0.7
COL7A1-202ENST00000422991 BTBD18B2RXH4 712 aa19.42■□□□□ 0.7
COL7A1-202ENST00000422991 NR3C2P08235 984 aa19.42■□□□□ 0.7
COL7A1-202ENST00000422991 CYP2C19P33261 490 aa19.42■□□□□ 0.7
COL7A1-202ENST00000422991 SREBF1P36956 1147 aa19.42■□□□□ 0.7
COL7A1-202ENST00000422991 SOX10P56693 466 aa19.42■□□□□ 0.7
COL7A1-202ENST00000422991 UBXN2AP68543 259 aa19.42■□□□□ 0.7
COL7A1-202ENST00000422991 NR5A1Q13285 461 aa19.42■□□□□ 0.7
COL7A1-202ENST00000422991 KRT25Q7Z3Z0 450 aa19.42■□□□□ 0.7
COL7A1-202ENST00000422991 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.42■□□□□ 0.7
COL7A1-202ENST00000422991 B4DLN1 442 aa19.41■□□□□ 0.7
COL7A1-202ENST00000422991 H3BQV1 296 aa19.41■□□□□ 0.7
COL7A1-202ENST00000422991 SNAI1O95863 264 aaPredicted RBP19.41■□□□□ 0.7
COL7A1-202ENST00000422991 SYT1P21579 422 aa19.41■□□□□ 0.7
COL7A1-202ENST00000422991 CCND2P30279 289 aa19.41■□□□□ 0.7
COL7A1-202ENST00000422991 MLLT1Q03111 559 aaPredicted RBP19.41■□□□□ 0.7
COL7A1-202ENST00000422991 PDE4DQ08499 809 aa19.41■□□□□ 0.7
COL7A1-202ENST00000422991 MFSD14CQ5VZR4 134 aa19.41■□□□□ 0.7
COL7A1-202ENST00000422991 PCNX4Q63HM2 1172 aa19.41■□□□□ 0.7
COL7A1-202ENST00000422991 CRYGNQ8WXF5 182 aa19.41■□□□□ 0.7
COL7A1-202ENST00000422991 ARMC5Q96C12 935 aa19.41■□□□□ 0.7
COL7A1-202ENST00000422991 FOXP1Q9H334 677 aaPredicted RBP19.41■□□□□ 0.7
COL7A1-202ENST00000422991 CCDC194A0A1B0GVG4 234 aa19.4■□□□□ 0.7
COL7A1-202ENST00000422991 KIF28PB7ZC32 967 aa19.4■□□□□ 0.7
COL7A1-202ENST00000422991 INHAP05111 366 aa19.4■□□□□ 0.7
COL7A1-202ENST00000422991 ARHGAP4P98171 946 aa19.4■□□□□ 0.7
COL7A1-202ENST00000422991 TRIM32Q13049 653 aa19.4■□□□□ 0.7
COL7A1-202ENST00000422991 SLC9C1Q4G0N8 1177 aa19.4■□□□□ 0.7
COL7A1-202ENST00000422991 MAP3K21Q5TCX8 1036 aa19.4■□□□□ 0.7
COL7A1-202ENST00000422991 XRRA1Q6P2D8 792 aa19.4■□□□□ 0.7
COL7A1-202ENST00000422991 VSIG10LQ86VR7 867 aa19.4■□□□□ 0.7
COL7A1-202ENST00000422991 KATNBL1Q9H079 304 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms