RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 NSUN6Q8TEA1 469 aaKnown RBP25.39■■□□□ 1.66
TRAF4-204ENST00000422344 TBC1D5Q92609 795 aa25.39■■□□□ 1.66
TRAF4-204ENST00000422344 VTI1AQ96AJ9 217 aa25.39■■□□□ 1.66
TRAF4-204ENST00000422344 LZTS2Q9BRK4 669 aa25.39■■□□□ 1.66
TRAF4-204ENST00000422344 LRRC2Q9BYS8 371 aa25.39■■□□□ 1.66
TRAF4-204ENST00000422344 GNEQ9Y223 722 aaKnown RBP25.39■■□□□ 1.66
TRAF4-204ENST00000422344 PRUNE2Q8WUY3 3088 aa25.38■■□□□ 1.65
TRAF4-204ENST00000422344 PNMA6FA0A0J9YX94 578 aa25.38■■□□□ 1.65
TRAF4-204ENST00000422344 DYNC1LI2O43237 492 aaPredicted RBP25.38■■□□□ 1.65
TRAF4-204ENST00000422344 PPP1R11O60927 126 aaPredicted RBP25.38■■□□□ 1.65
TRAF4-204ENST00000422344 ASGR1P07306 291 aa25.38■■□□□ 1.65
TRAF4-204ENST00000422344 SMAD3P84022 425 aaKnown RBP25.38■■□□□ 1.65
TRAF4-204ENST00000422344 CCSAPQ6IQ19 270 aaPredicted RBP25.38■■□□□ 1.65
TRAF4-204ENST00000422344 SYNE3Q6ZMZ3 975 aa25.38■■□□□ 1.65
TRAF4-204ENST00000422344 PIBF1Q8WXW3 757 aa25.38■■□□□ 1.65
TRAF4-204ENST00000422344 WDR11Q9BZH6 1224 aa25.38■■□□□ 1.65
TRAF4-204ENST00000422344 Q9Y3F1 56 aa25.38■■□□□ 1.65
TRAF4-204ENST00000422344 CYTH3O43739 400 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 ZEB2O60315 1214 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 REC8O95072 547 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 CLTBP09497 229 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 EDNRBP24530 442 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 ITGB8P26012 769 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 IRX5P78411 483 aaPredicted RBP25.37■■□□□ 1.65
TRAF4-204ENST00000422344 BEX3Q00994 111 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 SLC35G1Q2M3R5 365 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 TSGA10IPQ3SY00 556 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 RRP36Q96EU6 259 aaKnown RBP25.37■■□□□ 1.65
TRAF4-204ENST00000422344 TAAR1Q96RJ0 339 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 RMDN3Q96TC7 470 aa25.37■■□□□ 1.65
TRAF4-204ENST00000422344 VCANP13611 3396 aa25.36■■□□□ 1.65
TRAF4-204ENST00000422344 PQBP1O60828 265 aaKnown RBP25.36■■□□□ 1.65
TRAF4-204ENST00000422344 COL9A3Q14050 684 aaPredicted RBP25.36■■□□□ 1.65
TRAF4-204ENST00000422344 FSCN1Q16658 493 aaKnown RBP25.36■■□□□ 1.65
TRAF4-204ENST00000422344 DUSP28Q4G0W2 176 aa25.36■■□□□ 1.65
TRAF4-204ENST00000422344 ARHGEF16Q5VV41 709 aa25.36■■□□□ 1.65
TRAF4-204ENST00000422344 DHX32Q7L7V1 743 aaKnown RBP25.36■■□□□ 1.65
TRAF4-204ENST00000422344 RASEFQ8IZ41 740 aa25.36■■□□□ 1.65
TRAF4-204ENST00000422344 SCFD2Q8WU76 684 aa25.36■■□□□ 1.65
TRAF4-204ENST00000422344 SPZ1Q9BXG8 430 aa25.36■■□□□ 1.65
TRAF4-204ENST00000422344 TTYH1Q9H313 450 aaPredicted RBP25.36■■□□□ 1.65
TRAF4-204ENST00000422344 MAP3K20Q9NYL2 800 aaKnown RBP25.36■■□□□ 1.65
TRAF4-204ENST00000422344 COL20A1Q9P218 1284 aa25.36■■□□□ 1.65
TRAF4-204ENST00000422344 SEC63Q9UGP8 760 aaKnown RBP25.36■■□□□ 1.65
TRAF4-204ENST00000422344 ELP1O95163 1332 aa25.36■■□□□ 1.65
TRAF4-204ENST00000422344 HMGB1P09429 215 aaKnown RBP25.35■■□□□ 1.65
TRAF4-204ENST00000422344 RXRAP19793 462 aa25.35■■□□□ 1.65
TRAF4-204ENST00000422344 HSD17B4P51659 736 aa25.35■■□□□ 1.65
TRAF4-204ENST00000422344 NKX3-2P78367 333 aa25.35■■□□□ 1.65
TRAF4-204ENST00000422344 PPP2R5BQ15173 497 aa25.35■■□□□ 1.65
TRAF4-204ENST00000422344 SAMD3Q8N6K7 520 aa25.35■■□□□ 1.65
TRAF4-204ENST00000422344 MAFAQ8NHW3 353 aaPredicted RBP25.35■■□□□ 1.65
TRAF4-204ENST00000422344 MYLIPQ8WY64 445 aa25.35■■□□□ 1.65
TRAF4-204ENST00000422344 IWS1Q96ST2 819 aa25.35■■□□□ 1.65
TRAF4-204ENST00000422344 CDH23Q9H251 3354 aa25.35■■□□□ 1.65
TRAF4-204ENST00000422344 RBM47A0AV96 593 aaKnown RBP25.34■■□□□ 1.65
TRAF4-204ENST00000422344 CTAGE5O15320 804 aa25.34■■□□□ 1.65
TRAF4-204ENST00000422344 RAG1P15918 1043 aa25.34■■□□□ 1.65
TRAF4-204ENST00000422344 EIF2AK2P19525 551 aaKnown RBP25.34■■□□□ 1.65
TRAF4-204ENST00000422344 SMARCA1P28370 1054 aa25.34■■□□□ 1.65
TRAF4-204ENST00000422344 EPHB4P54760 987 aa25.34■■□□□ 1.65
TRAF4-204ENST00000422344 SGMS1Q86VZ5 419 aa25.34■■□□□ 1.65
TRAF4-204ENST00000422344 MICU3Q86XE3 530 aa25.34■■□□□ 1.65
TRAF4-204ENST00000422344 RAB11FIP4Q86YS3 637 aa25.34■■□□□ 1.65
TRAF4-204ENST00000422344 RNPC3Q96LT9 517 aaKnown RBP25.34■■□□□ 1.65
TRAF4-204ENST00000422344 A0A0U1RQG5 324 aaPredicted RBP25.33■■□□□ 1.65
TRAF4-204ENST00000422344 GCOM1H8Y6P7 765 aaPredicted RBP25.33■■□□□ 1.65
TRAF4-204ENST00000422344 OPLAHO14841 1288 aa25.33■■□□□ 1.65
TRAF4-204ENST00000422344 KIAA0355O15063 1070 aa25.33■■□□□ 1.65
TRAF4-204ENST00000422344 NKRFO15226 690 aaKnown RBP eCLIP25.33■■□□□ 1.652e-7■■□□□ 11.4
TRAF4-204ENST00000422344 POLR2MP0CAP2 368 aa25.33■■□□□ 1.65
TRAF4-204ENST00000422344 FGD1P98174 961 aa25.33■■□□□ 1.65
TRAF4-204ENST00000422344 STXBP2Q15833 593 aa25.33■■□□□ 1.65
TRAF4-204ENST00000422344 ADCK5Q3MIX3 580 aa25.33■■□□□ 1.65
TRAF4-204ENST00000422344 TMEM63BQ5T3F8 832 aa25.33■■□□□ 1.65
TRAF4-204ENST00000422344 TMEM39AQ9NV64 488 aa25.33■■□□□ 1.65
TRAF4-204ENST00000422344 MROH7Q68CQ1 1323 aa25.33■■□□□ 1.64
TRAF4-204ENST00000422344 DCDC2CA8MYV0 355 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 CABYRO75952 493 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 PLEKHA8P1O95397 391 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 TXNP10599 105 aaKnown RBP25.32■■□□□ 1.64
TRAF4-204ENST00000422344 PTGS1P23219 599 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 HOXA13P31271 388 aaPredicted RBP25.32■■□□□ 1.64
TRAF4-204ENST00000422344 GHRHRQ02643 423 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 TTLL4Q14679 1199 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 BRDTQ58F21 947 aaPredicted RBP25.32■■□□□ 1.64
TRAF4-204ENST00000422344 CXCL17Q6UXB2 119 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 FANCBQ8NB91 859 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 OR6J1Q8NGC5 347 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 TCEANC2Q96MN5 208 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 PXMP2Q9NR77 195 aa25.32■■□□□ 1.64
TRAF4-204ENST00000422344 HSPA4P34932 840 aa25.31■■□□□ 1.64
TRAF4-204ENST00000422344 CPT1AP50416 773 aa25.31■■□□□ 1.64
TRAF4-204ENST00000422344 EXOSC10Q01780 885 aaKnown RBP25.31■■□□□ 1.64
TRAF4-204ENST00000422344 BAZ2BQ9UIF8 2168 aaKnown RBP25.3■■□□□ 1.64
TRAF4-204ENST00000422344 NR3C2P08235 984 aa25.3■■□□□ 1.64
TRAF4-204ENST00000422344 FPGSQ05932 587 aa25.3■■□□□ 1.64
TRAF4-204ENST00000422344 SEPT14Q6ZU15 432 aa25.3■■□□□ 1.64
TRAF4-204ENST00000422344 ANKRD33Q7Z3H0 272 aa25.3■■□□□ 1.64
TRAF4-204ENST00000422344 CMTR1Q8N1G2 835 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms