RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 NBPF12Q5TAG4 269 aaPredicted RBP10.81□□□□□ -0.68
CMSS1-201ENST00000421999 FASTKD5Q7L8L6 764 aaKnown RBP10.81□□□□□ -0.68
CMSS1-201ENST00000421999 ACER1Q8TDN7 264 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 ZKSCAN4Q969J2 545 aaPredicted RBP10.81□□□□□ -0.68
CMSS1-201ENST00000421999 NOC4LQ9BVI4 516 aaKnown RBP10.81□□□□□ -0.68
CMSS1-201ENST00000421999 KIAA1024Q9UPX6 916 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 PKD1L3Q7Z443 1732 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 PPP6R2O75170 966 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 TNNI1P19237 187 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 ANO3Q9BYT9 981 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 KCNG1Q9UIX4 513 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 BAZ2BQ9UIF8 2168 aaKnown RBP10.81□□□□□ -0.68
CMSS1-201ENST00000421999 VIL1P09327 827 aaKnown RBP10.81□□□□□ -0.68
CMSS1-201ENST00000421999 STAT3P40763 770 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 CENPHQ9H3R5 247 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 SH3GLB2Q9NR46 395 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 KIAA1468Q9P260 1216 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 FEM1BQ9UK73 627 aa10.81□□□□□ -0.68
CMSS1-201ENST00000421999 XIRP1Q702N8 1843 aaKnown RBP10.81□□□□□ -0.68
CMSS1-201ENST00000421999 A0A1W2PQ27 194 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 A0A1W2PQ64 194 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 A0A1W2PQD8 194 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 INO80B-WBP1J3KQ70 363 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 CYLC1P35663 651 aaPredicted RBP10.8□□□□□ -0.68
CMSS1-201ENST00000421999 ECE1P42892 770 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 SEC23AQ15436 765 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 IQCEQ6IPM2 695 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 INO80BQ9C086 356 aaPredicted RBP10.8□□□□□ -0.68
CMSS1-201ENST00000421999 IFNKQ9P0W0 207 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 AKT3Q9Y243 479 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 GAKO14976 1311 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 KRBA2Q6ZNG9 492 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 EPSTI1Q96J88 318 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 CCDC42Q96M95 316 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 ALS2CR12Q96Q35 445 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 SPZ1Q9BXG8 430 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 VPS33BQ9H267 617 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 RPAP3Q9H6T3 665 aaPredicted RBP10.8□□□□□ -0.68
CMSS1-201ENST00000421999 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.8□□□□□ -0.68
CMSS1-201ENST00000421999 A0A087WWV3 80 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 FAM205CA6NFA0 338 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 CALUO43852 315 aaPredicted RBP10.8□□□□□ -0.68
CMSS1-201ENST00000421999 CD19P15391 556 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 CCND2P30279 289 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 INPP5BP32019 993 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 EPHX2P34913 555 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 PDXDC2PQ6P474 469 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 SYT17Q9BSW7 474 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 WDR11Q9BZH6 1224 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 GSTTP1A0A1W2PQM5 241 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 MARK3P27448 753 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 LONP1P36776 959 aaKnown RBP10.8□□□□□ -0.68
CMSS1-201ENST00000421999 LIG4P49917 911 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 SLC8A3P57103 927 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 ZNF445P59923 1031 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 SPDYE2Q495Y8 402 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 MAP1SQ66K74 1059 aaPredicted RBP10.8□□□□□ -0.68
CMSS1-201ENST00000421999 CEP170P1Q96L14 293 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 APOL6Q9BWW8 343 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 VCPKMTQ9H867 229 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 RABGAP1Q9Y3P9 1069 aa10.8□□□□□ -0.68
CMSS1-201ENST00000421999 CYP2J2P51589 502 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 PAK1Q13153 545 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 TRERF1Q96PN7 1200 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 IL17RBQ9NRM6 502 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 ADARB2Q9NS39 739 aaKnown RBP10.79□□□□□ -0.68
CMSS1-201ENST00000421999 LUC7L2Q9Y383 392 aaKnown RBP10.79□□□□□ -0.68
CMSS1-201ENST00000421999 C5P01031 1676 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 YDJCA8MPS7 323 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 ESPNB1AK53 854 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 K7ENM7 598 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 GCFC2P16383 781 aaKnown RBP10.79□□□□□ -0.68
CMSS1-201ENST00000421999 HOXD10P28358 340 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 SHMT1P34896 483 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 CAP2P40123 477 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 CCDC186Q7Z3E2 898 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 RSPH3Q86UC2 560 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 TRMT44Q8IYL2 757 aaKnown RBP10.79□□□□□ -0.68
CMSS1-201ENST00000421999 ZNF280CQ8ND82 737 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 RBM46Q8TBY0 533 aaKnown RBP10.79□□□□□ -0.68
CMSS1-201ENST00000421999 IWS1Q96ST2 819 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 CBX8Q9HC52 389 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.79□□□□□ -0.68
CMSS1-201ENST00000421999 ACTN2P35609 894 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 ODR4Q5SWX8 454 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 GRAMD1CQ8IYS0 662 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 IDI2Q9BXS1 227 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 FBXO28Q9NVF7 368 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 FAM198AQ9UFP1 575 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 PCDHA6Q9UN73 950 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 PCDHA8Q9Y5H6 950 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 PCDHA5Q9Y5H7 936 aa10.79□□□□□ -0.68
CMSS1-201ENST00000421999 CSPG5O95196 566 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 MTERF2Q49AM1 385 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 TAF3Q5VWG9 929 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 RASGRP2Q7LDG7 609 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 ANKRD13AQ8IZ07 590 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 EEF2KMTQ96G04 330 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 C16orf45Q96MC5 204 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms