RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 LRRC53A6NM62 1247 aa23.58■■□□□ 1.36
USP48-205ENST00000421625 MEFVO15553 781 aaPredicted RBP23.58■■□□□ 1.36
USP48-205ENST00000421625 ERCC3P19447 782 aa23.58■■□□□ 1.36
USP48-205ENST00000421625 MAGEA1P43355 309 aa23.58■■□□□ 1.36
USP48-205ENST00000421625 SEMA6BQ9H3T3 888 aa23.58■■□□□ 1.36
USP48-205ENST00000421625 MMRN2Q9H8L6 949 aa23.58■■□□□ 1.36
USP48-205ENST00000421625 ZPR1O75312 459 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 LCA5LO95447 670 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 DNA2P51530 1060 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 CFAP58Q5T655 872 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 KLHDC7AQ5VTJ3 777 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 RRAGAQ7L523 313 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 IQCKQ8N0W5 287 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 CACNA1SQ13698 1873 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 H0YHG0 523 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 GUCY2FP51841 1108 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 GSCP56915 257 aaPredicted RBP23.57■■□□□ 1.36
USP48-205ENST00000421625 RASSF7Q02833 373 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 GFPT1Q06210 699 aaPredicted RBP23.57■■□□□ 1.36
USP48-205ENST00000421625 NAA35Q5VZE5 725 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 KDM7AQ6ZMT4 941 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 TMC4Q7Z404 712 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 PIK3R5Q8WYR1 880 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 EPB41L5Q9HCM4 733 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 PCDHA6Q9UN73 950 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 PCDHA8Q9Y5H6 950 aa23.57■■□□□ 1.36
USP48-205ENST00000421625 COL22A1Q8NFW1 1626 aaPredicted RBP23.57■■□□□ 1.36
USP48-205ENST00000421625 M0R2N6 131 aa23.56■■□□□ 1.36
USP48-205ENST00000421625 CYP2D6P10635 497 aa23.56■■□□□ 1.36
USP48-205ENST00000421625 IGHMBP2P38935 993 aaKnown RBP23.56■■□□□ 1.36
USP48-205ENST00000421625 CABP7Q86V35 215 aa23.56■■□□□ 1.36
USP48-205ENST00000421625 STAG2Q8N3U4 1231 aa23.56■■□□□ 1.36
USP48-205ENST00000421625 KIAA0895Q8NCT3 520 aa23.56■■□□□ 1.36
USP48-205ENST00000421625 ATXN2Q99700 1313 aaKnown RBP23.56■■□□□ 1.36
USP48-205ENST00000421625 NAP1L1P55209 391 aaKnown RBP23.56■■□□□ 1.36
USP48-205ENST00000421625 GUCY2DQ02846 1103 aa23.56■■□□□ 1.36
USP48-205ENST00000421625 SLC4A8Q2Y0W8 1093 aa23.56■■□□□ 1.36
USP48-205ENST00000421625 VWA3BQ502W6 1294 aa23.56■■□□□ 1.36
USP48-205ENST00000421625 HEXIM1O94992 359 aaKnown RBP23.55■■□□□ 1.36
USP48-205ENST00000421625 USP8P40818 1118 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 SLC1A4P43007 532 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 TXNRD1Q16881 649 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 IFT20Q8IY31 132 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 EPN3Q9H201 632 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 NDST4Q9H3R1 872 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 SLC39A2Q9NP94 309 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 GDF3Q9NR23 364 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 FSBPO95073 299 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 SEC24CP53992 1094 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 RCSD1Q6JBY9 416 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 A6NNZ2 444 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 SF3B2Q13435 895 aaKnown RBP23.55■■□□□ 1.36
USP48-205ENST00000421625 TRADDQ15628 312 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 TUBB8Q3ZCM7 444 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 ZNF473Q8WTR7 871 aaKnown RBP23.55■■□□□ 1.36
USP48-205ENST00000421625 CABS1Q96KC9 395 aa23.55■■□□□ 1.36
USP48-205ENST00000421625 ERVV-1B6SEH8 477 aa23.54■■□□□ 1.36
USP48-205ENST00000421625 NR1D1P20393 614 aa23.54■■□□□ 1.36
USP48-205ENST00000421625 CCDC47Q96A33 483 aaKnown RBP23.54■■□□□ 1.36
USP48-205ENST00000421625 ACSBG1Q96GR2 724 aa23.54■■□□□ 1.36
USP48-205ENST00000421625 ORC4O43929 436 aa23.54■■□□□ 1.36
USP48-205ENST00000421625 PCP11498 1178 aaKnown RBP23.54■■□□□ 1.36
USP48-205ENST00000421625 PPARDQ03181 441 aa23.54■■□□□ 1.36
USP48-205ENST00000421625 COL4A1P02462 1669 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 CFAP221Q4G0U5 840 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 GLE1Q53GS7 698 aaKnown RBP23.53■■□□□ 1.36
USP48-205ENST00000421625 MYH1P12882 1939 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 TSPY2A6NKD2 308 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 PJA2O43164 708 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 MAP2K2P36507 400 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 SEMA3FQ13275 785 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 PTGISQ16647 500 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 BAP1Q92560 729 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 NOX5Q96PH1 765 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 C7orf25Q9BPX7 421 aa23.53■■□□□ 1.36
USP48-205ENST00000421625 A0A1B0GUL6 1792 aa23.52■■□□□ 1.36
USP48-205ENST00000421625 PPP1R37O75864 691 aa23.52■■□□□ 1.36
USP48-205ENST00000421625 KIF5BP33176 963 aa23.52■■□□□ 1.36
USP48-205ENST00000421625 HDLBPQ00341 1268 aaKnown RBP23.52■■□□□ 1.36
USP48-205ENST00000421625 PAK2Q13177 524 aa23.52■■□□□ 1.36
USP48-205ENST00000421625 CASKIN2Q8WXE0 1202 aa23.52■■□□□ 1.36
USP48-205ENST00000421625 ZNF804BA4D1E1 1349 aa23.52■■□□□ 1.36
USP48-205ENST00000421625 CCDC152Q4G0S7 254 aa23.52■■□□□ 1.36
USP48-205ENST00000421625 RNF187Q5TA31 235 aaPredicted RBP23.52■■□□□ 1.36
USP48-205ENST00000421625 CCDC155Q8N6L0 562 aa23.52■■□□□ 1.36
USP48-205ENST00000421625 CXorf56Q9H5V9 222 aa23.52■■□□□ 1.36
USP48-205ENST00000421625 SH3GLB2Q9NR46 395 aa23.52■■□□□ 1.36
USP48-205ENST00000421625 RNASE9P60153 205 aaKnown RBP23.51■■□□□ 1.35
USP48-205ENST00000421625 SLC35G1Q2M3R5 365 aa23.51■■□□□ 1.35
USP48-205ENST00000421625 ASTE1Q2TB18 679 aaPredicted RBP23.51■■□□□ 1.35
USP48-205ENST00000421625 HEATR3Q7Z4Q2 680 aa23.51■■□□□ 1.35
USP48-205ENST00000421625 KRT12Q99456 494 aa23.51■■□□□ 1.35
USP48-205ENST00000421625 MTMR7Q9Y216 660 aa23.51■■□□□ 1.35
USP48-205ENST00000421625 FTCDO95954 541 aa23.51■■□□□ 1.35
USP48-205ENST00000421625 IQCDQ96DY2 449 aa23.51■■□□□ 1.35
USP48-205ENST00000421625 CCT8L2Q96SF2 557 aa23.51■■□□□ 1.35
USP48-205ENST00000421625 JPH2Q9BR39 696 aaPredicted RBP23.51■■□□□ 1.35
USP48-205ENST00000421625 CUEDC2Q9H467 287 aa23.51■■□□□ 1.35
USP48-205ENST00000421625 TCP11L1Q9NUJ3 509 aa23.51■■□□□ 1.35
USP48-205ENST00000421625 CENPPQ6IPU0 288 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms