RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 TCP11Q8WWU5 503 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 TNNC1P63316 161 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 ADALQ6DHV7 355 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 RFX7Q2KHR2 1363 aa11.84□□□□□ -0.51
PTCH1-206ENST00000421141 CETPP11597 493 aa11.83□□□□□ -0.51
PTCH1-206ENST00000421141 AP3B2Q13367 1082 aa11.83□□□□□ -0.51
PTCH1-206ENST00000421141 MTMR2Q13614 643 aa11.83□□□□□ -0.51
PTCH1-206ENST00000421141 RASA3Q14644 834 aa11.83□□□□□ -0.51
PTCH1-206ENST00000421141 INTS5Q6P9B9 1019 aaKnown RBP11.83□□□□□ -0.51
PTCH1-206ENST00000421141 KCNV1Q6PIU1 500 aa11.83□□□□□ -0.51
PTCH1-206ENST00000421141 SMIM5Q71RC9 77 aa11.83□□□□□ -0.51
PTCH1-206ENST00000421141 FAM167AQ96KS9 214 aa11.83□□□□□ -0.51
PTCH1-206ENST00000421141 RGS12O14924 1447 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 ADGRB2O60241 1585 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 CYP21A2P08686 494 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 PTPREP23469 700 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 PPP1R7Q15435 360 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 BLZF1Q9H2G9 400 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 KIF11P52732 1056 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 MTX1Q13505 466 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 SEPT2Q15019 361 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 CEP128Q6ZU80 1094 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 NSUN6Q8TEA1 469 aaKnown RBP11.83□□□□□ -0.52
PTCH1-206ENST00000421141 A0A1W2PRG0 241 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 ACAD9Q9H845 621 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 ATP8B3O60423 1300 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 UBN2Q6ZU65 1347 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 BTBD18B2RXH4 712 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 EPHX2P34913 555 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 KBTBD13C9JR72 458 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 HUNKP57058 714 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 NLRP12P59046 1061 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 NEDD9Q14511 834 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 RAVER2Q9HCJ3 691 aaKnown RBP11.83□□□□□ -0.52
PTCH1-206ENST00000421141 DCP1AQ9NPI6 582 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-206ENST00000421141 HESX1Q9UBX0 185 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 PHLPP2Q6ZVD8 1323 aa11.83□□□□□ -0.52
PTCH1-206ENST00000421141 ESPNB1AK53 854 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 PRPF3O43395 683 aaKnown RBP11.82□□□□□ -0.52
PTCH1-206ENST00000421141 SKILP12757 684 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 IGSF22Q8N9C0 903 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 GYS1P13807 737 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 HHIPL2Q6UWX4 724 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-206ENST00000421141 SNAP23O00161 211 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 CYP26C1Q6V0L0 522 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 NLRP4Q96MN2 994 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 GOLGA6CA6NDK9 693 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 GOLGA6BA6NDN3 693 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 GOLGA6DP0CG33 693 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 ST7Q9NRC1 585 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 GOLGA6AQ9NYA3 693 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 MYO1EQ12965 1108 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-206ENST00000421141 PAXBP1Q9Y5B6 917 aa11.82□□□□□ -0.52
PTCH1-206ENST00000421141 ASB14A6NK59 587 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 FBXO18Q8NFZ0 1043 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 CCDC77Q9BR77 488 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 METTL14Q9HCE5 456 aaKnown RBP11.81□□□□□ -0.52
PTCH1-206ENST00000421141 DENND3A2RUS2 1198 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 ANKRD13AQ8IZ07 590 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 LARP4BQ92615 738 aaKnown RBP11.81□□□□□ -0.52
PTCH1-206ENST00000421141 SNX25Q9H3E2 840 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 ARMCX3Q9UH62 379 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-206ENST00000421141 FAM169AQ9Y6X4 670 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 NTSR2O95665 410 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 COG2Q14746 738 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 MTERF2Q49AM1 385 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 PPP1R18Q6NYC8 613 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 URGCPQ8TCY9 931 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 MICAL1Q8TDZ2 1067 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 TMEM206Q9H813 350 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 GUCA1BQ9UMX6 200 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 RGPD5Q99666 1765 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 SRGAP2CP0DJJ0 459 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 ODF2LQ9ULJ1 636 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 HMGCS2P54868 508 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 SNAP25P60880 206 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 SYMPKQ92797 1274 aaKnown RBP11.81□□□□□ -0.52
PTCH1-206ENST00000421141 RNF146Q9NTX7 359 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 PI4K2BQ8TCG2 481 aa11.81□□□□□ -0.52
PTCH1-206ENST00000421141 UQCRHLA0A096LP55 91 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 OATP04181 439 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 UQCRHP07919 91 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 STAT3P40763 770 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 TUBB4BP68371 445 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 FAM81BQ96LP2 452 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 CLSTN2Q9H4D0 955 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 MMP1P03956 469 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 GTF2A2P52657 109 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 GBP6Q6ZN66 633 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 F5H6K3 240 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 KLRC3Q07444 240 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 ACCSQ96QU6 501 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 FAM204AQ9H8W3 233 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 IFRD2Q12894 506 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-206ENST00000421141 CLUL1Q15846 466 aa11.8□□□□□ -0.52
PTCH1-206ENST00000421141 BAG1Q99933 345 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-206ENST00000421141 OSBPL5Q9H0X9 879 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms