RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SLFN12Q8IYM2 578 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 ST13P4Q8IZP2 240 aaPredicted RBP13.43□□□□□ -0.26
CLCN4-203ENST00000421085 FAM133AQ8N9E0 248 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 CCDC127Q96BQ5 260 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 DRC3Q9H069 523 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 ZMYND12Q9H0C1 365 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 COL4A3BPQ9Y5P4 624 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 MRFAP1Q9Y605 127 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 WDR91A4D1P6 747 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 MYO1FO00160 1098 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 GOLGA8HP0CJ92 632 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 GGCXP38435 758 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 CYP27A1Q02318 531 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 LLGL1Q15334 1064 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 FMO2Q99518 471 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 MAGEF1Q9HAY2 307 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 RWDD2AQ9UIY3 292 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 SLMAPQ14BN4 828 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 SLFNL1Q499Z3 407 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLCN4-203ENST00000421085 SMYD2Q9NRG4 433 aa13.43□□□□□ -0.26
CLCN4-203ENST00000421085 EIF3BP55884 814 aaKnown RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 NAA30Q147X3 362 aaPredicted RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 MAN2A1Q16706 1144 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 NUGGCQ68CJ6 796 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 GALNT17Q6IS24 598 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 PNMA1Q8ND90 353 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 HDAC11Q96DB2 347 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 OSBPL3Q9H4L5 887 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 YY1AP1Q9H869 796 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 LARGE1O95461 756 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 ESRRAP11474 423 aaPredicted RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 ECE1P42892 770 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 KIF23Q02241 960 aaPredicted RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 TEKT1Q969V4 418 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 EDC4Q6P2E9 1401 aaKnown RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 PDE6AP16499 860 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 CNGA1P29973 690 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 PDCD2Q16342 344 aaPredicted RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 KRT80Q6KB66 452 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 DCLK2Q8N568 766 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 CYTH2Q99418 400 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 SCINQ9Y6U3 715 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 MAPK13O15264 365 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 CYP21A2P08686 494 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 ACTN3Q08043 901 aaPredicted RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 ARMCX5Q6P1M9 558 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 ZCCHC17Q9NP64 241 aaKnown RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 DDAH1O94760 285 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 FMNL1O95466 1100 aaPredicted RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 NR2F2P24468 414 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 ZBED6P86452 979 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 ZC3H18Q86VM9 953 aaKnown RBP13.42□□□□□ -0.26
CLCN4-203ENST00000421085 AZI2Q9H6S1 392 aa13.42□□□□□ -0.26
CLCN4-203ENST00000421085 LIG4P49917 911 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 HDLBPQ00341 1268 aaKnown RBP13.41□□□□□ -0.26
CLCN4-203ENST00000421085 LRRC41Q15345 812 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 C6orf118Q5T5N4 469 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 ZNF589Q86UQ0 364 aaPredicted RBP13.41□□□□□ -0.26
CLCN4-203ENST00000421085 DEPTORQ8TB45 409 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 RIOK1Q9BRS2 568 aaKnown RBP13.41□□□□□ -0.26
CLCN4-203ENST00000421085 KLRF2D3W0D1 207 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 CASP2P42575 452 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 YARSP54577 528 aaKnown RBP13.41□□□□□ -0.26
CLCN4-203ENST00000421085 RINT1Q6NUQ1 792 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 CUEDC2Q9H467 287 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 MORC2Q9Y6X9 1032 aaPredicted RBP13.41□□□□□ -0.26
CLCN4-203ENST00000421085 SLFN14P0C7P3 912 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 MAPK4P31152 587 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 DR1Q01658 176 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 RESTQ13127 1097 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 RSBN1LQ6PCB5 846 aaPredicted RBP13.41□□□□□ -0.26
CLCN4-203ENST00000421085 GGA1Q9UJY5 639 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 UHRF1BP1LA0JNW5 1464 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 AFPP02771 609 aaKnown RBP13.41□□□□□ -0.26
CLCN4-203ENST00000421085 TCP10Q12799 353 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 TRIP13Q15645 432 aaPredicted RBP13.41□□□□□ -0.26
CLCN4-203ENST00000421085 NSMFQ6X4W1 530 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 RAPH1Q70E73 1250 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 RFX6Q8HWS3 928 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 SMCR8Q8TEV9 937 aaPredicted RBP13.41□□□□□ -0.26
CLCN4-203ENST00000421085 CCDC138Q96M89 665 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.41□□□□□ -0.26
CLCN4-203ENST00000421085 A2MP01023 1474 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 H0Y3Z8 333 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 MT-ND3P03897 115 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 MMEP08473 750 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 KIF11P52732 1056 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 ZNF653Q96CK0 615 aa13.41□□□□□ -0.26
CLCN4-203ENST00000421085 GOLGA8QA0A0J9YX86 632 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 GOLGA8OA6NCC3 632 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 GOLGA8NF8WBI6 632 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 SRGAP2O75044 1071 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 CUL1Q13616 776 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 SARM1Q6SZW1 724 aa13.4□□□□□ -0.26
CLCN4-203ENST00000421085 TRMT2AQ8IZ69 625 aaKnown RBP13.4□□□□□ -0.26
CLCN4-203ENST00000421085 CEP70Q8NHQ1 597 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms