RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 TCP11X2Q5H9J9 407 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 SRRTQ9BXP5 876 aaKnown RBP17.13■□□□□ 0.33
SEC24D-202ENST00000419654 PCDHA6Q9UN73 950 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 PCDHA8Q9Y5H6 950 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 GOLGA6L9A6NEM1 432 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 hCG_1984214I3L0E3 225 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 GYS2P54840 703 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 ATP2B2Q01814 1243 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 SEPT2Q15019 361 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 ABCB5Q2M3G0 1257 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 NAALADL2Q58DX5 795 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 DTHD1Q6ZMT9 781 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 ZNF713Q8N859 430 aaPredicted RBP17.13■□□□□ 0.33
SEC24D-202ENST00000419654 UIMC1Q96RL1 719 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 CTAGE1Q96RT6 745 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 GPCPD1Q9NPB8 672 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 BCS1LQ9Y276 419 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 KIF5CO60282 957 aa17.12■□□□□ 0.33
SEC24D-202ENST00000419654 ZRANB2O95218 330 aaKnown RBP eCLIP17.12■□□□□ 0.33
SEC24D-202ENST00000419654 NAPAP54920 295 aa17.12■□□□□ 0.33
SEC24D-202ENST00000419654 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
SEC24D-202ENST00000419654 UBA7P41226 1012 aa17.12■□□□□ 0.33
SEC24D-202ENST00000419654 JAG1P78504 1218 aa17.12■□□□□ 0.33
SEC24D-202ENST00000419654 RRP1BQ14684 758 aaKnown RBP17.12■□□□□ 0.33
SEC24D-202ENST00000419654 TNIP1Q15025 636 aa17.12■□□□□ 0.33
SEC24D-202ENST00000419654 LETM2Q2VYF4 491 aa17.12■□□□□ 0.33
SEC24D-202ENST00000419654 ZNF658Q5TYW1 1059 aaPredicted RBP17.12■□□□□ 0.33
SEC24D-202ENST00000419654 DISC1Q9NRI5 854 aa17.12■□□□□ 0.33
SEC24D-202ENST00000419654 ABHD10Q9NUJ1 306 aa17.12■□□□□ 0.33
SEC24D-202ENST00000419654 ARFGEF1Q9Y6D6 1849 aa17.12■□□□□ 0.33
SEC24D-202ENST00000419654 ESYT2A0FGR8 921 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 NKRFO15226 690 aaKnown RBP eCLIP17.11■□□□□ 0.33
SEC24D-202ENST00000419654 GDF11O95390 407 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 RHOXF2BP0C7M4 288 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 TXLNAP40222 546 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 KLK7P49862 253 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 MMP14P50281 582 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 ICA1Q05084 483 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 IRF2BP1Q8IU81 584 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 RHOXF2Q9BQY4 288 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 JMJD4Q9H9V9 463 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 RWDD2AQ9UIY3 292 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 TPM1P09493 284 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 TTBK2Q6IQ55 1244 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 CC2D1AQ6P1N0 951 aaPredicted RBP17.11■□□□□ 0.33
SEC24D-202ENST00000419654 FAM83AQ86UY5 434 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 ADGRF4Q8IZF3 695 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 DCAF4Q8WV16 495 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 TBC1D8O95759 1140 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 RBM26Q5T8P6 1007 aaKnown RBP17.11■□□□□ 0.33
SEC24D-202ENST00000419654 RSRC2Q7L4I2 434 aaKnown RBP17.11■□□□□ 0.33
SEC24D-202ENST00000419654 CNGA4Q8IV77 575 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 MTMR8Q96EF0 704 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 TRIM47Q96LD4 638 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 SUGCTQ9HAC7 445 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.11■□□□□ 0.333e-18■■■■■ 112.5
SEC24D-202ENST00000419654 C6orf50Q9HD87 102 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 GUCA1BQ9UMX6 200 aa17.11■□□□□ 0.33
SEC24D-202ENST00000419654 SMCO2A6NFE2 343 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 WNT10BO00744 389 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 ENC1O14682 589 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 GNA11P29992 359 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 CHMP4BP1P59074 171 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 GOLGA1Q92805 767 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 MYOZ2Q9NPC6 264 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 LIMA1Q9UHB6 759 aaKnown RBP17.1■□□□□ 0.33
SEC24D-202ENST00000419654 PNMA6FA0A0J9YX94 578 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 TTC26A0AVF1 554 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 CCNT1O60563 726 aaKnown RBP17.1■□□□□ 0.33
SEC24D-202ENST00000419654 GH2P01242 217 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 ZNF280AP59817 542 aaPredicted RBP17.1■□□□□ 0.33
SEC24D-202ENST00000419654 CCDC96Q2M329 555 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 KCTD1Q719H9 257 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 GMCL1P1Q8NEA9 526 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 VEZTQ9HBM0 779 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
SEC24D-202ENST00000419654 RPS12P25398 132 aaKnown RBP17.09■□□□□ 0.33
SEC24D-202ENST00000419654 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
SEC24D-202ENST00000419654 NBPF9Q3BBW0 867 aa17.09■□□□□ 0.33
SEC24D-202ENST00000419654 JAKMIP3Q5VZ66 844 aa17.09■□□□□ 0.33
SEC24D-202ENST00000419654 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
SEC24D-202ENST00000419654 B4DLN1 442 aa17.09■□□□□ 0.33
SEC24D-202ENST00000419654 TBC1D12O60347 775 aa17.09■□□□□ 0.33
SEC24D-202ENST00000419654 PRELPP51888 382 aa17.09■□□□□ 0.33
SEC24D-202ENST00000419654 SLFN13Q68D06 897 aa17.09■□□□□ 0.33
SEC24D-202ENST00000419654 GPR161Q8N6U8 529 aaKnown RBP17.09■□□□□ 0.33
SEC24D-202ENST00000419654 ANKRD20A12PQ8NF67 263 aa17.09■□□□□ 0.33
SEC24D-202ENST00000419654 BIN2Q9UBW5 565 aaPredicted RBP17.09■□□□□ 0.33
SEC24D-202ENST00000419654 SYNPO2Q9UMS6 1093 aa17.09■□□□□ 0.33
SEC24D-202ENST00000419654 KIF20AO95235 890 aa17.08■□□□□ 0.33
SEC24D-202ENST00000419654 FCER1AP12319 257 aa17.08■□□□□ 0.33
SEC24D-202ENST00000419654 PLCG1P19174 1290 aa17.08■□□□□ 0.33
SEC24D-202ENST00000419654 TECP42680 631 aa17.08■□□□□ 0.33
SEC24D-202ENST00000419654 RASSF7Q02833 373 aa17.08■□□□□ 0.33
SEC24D-202ENST00000419654 NCAPH2Q6IBW4 605 aa17.08■□□□□ 0.33
SEC24D-202ENST00000419654 KRT25Q7Z3Z0 450 aa17.08■□□□□ 0.33
SEC24D-202ENST00000419654 TMEM39BQ9GZU3 492 aa17.08■□□□□ 0.33
SEC24D-202ENST00000419654 TMEM260Q9NX78 707 aa17.08■□□□□ 0.33
SEC24D-202ENST00000419654 HDAC6Q9UBN7 1215 aa17.08■□□□□ 0.33
SEC24D-202ENST00000419654 SLC16A2P36021 539 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms