RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 BRDTQ58F21 947 aaPredicted RBP11.19□□□□□ -0.62
CTSA-205ENST00000419493 TMEM63BQ5T3F8 832 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 C1orf53Q5VUE5 145 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 ERICH6BQ5W0A0 696 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 CCSAPQ6IQ19 270 aaPredicted RBP11.19□□□□□ -0.62
CTSA-205ENST00000419493 CXCL17Q6UXB2 119 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 DHX32Q7L7V1 743 aaKnown RBP11.19□□□□□ -0.62
CTSA-205ENST00000419493 FCHSD1Q86WN1 690 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 MICU3Q86XE3 530 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 CMTR1Q8N1G2 835 aaKnown RBP11.19□□□□□ -0.62
CTSA-205ENST00000419493 OR6J1Q8NGC5 347 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 SCFD2Q8WU76 684 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 TMEM39AQ9NV64 488 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 COL20A1Q9P218 1284 aa11.19□□□□□ -0.62
CTSA-205ENST00000419493 ELP1O95163 1332 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 A0A0U1RQG5 324 aaPredicted RBP11.18□□□□□ -0.62
CTSA-205ENST00000419493 PLEKHA8P1O95397 391 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 NR3C2P08235 984 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 HMGB1P09429 215 aaKnown RBP11.18□□□□□ -0.62
CTSA-205ENST00000419493 CLTBP09497 229 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 MYCLP12524 364 aaPredicted RBP11.18□□□□□ -0.62
CTSA-205ENST00000419493 RAG1P15918 1043 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 BMP8BP34820 402 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 TSGA10IPQ3SY00 556 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 CUL5Q93034 780 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 IWS1Q96ST2 819 aa11.18□□□□□ -0.62
CTSA-205ENST00000419493 MAP3K20Q9NYL2 800 aaKnown RBP11.18□□□□□ -0.62
CTSA-205ENST00000419493 BAZ2BQ9UIF8 2168 aaKnown RBP11.17□□□□□ -0.62
CTSA-205ENST00000419493 MROH7Q68CQ1 1323 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 A0A1W2PPC1 479 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 RBM47A0AV96 593 aaKnown RBP11.17□□□□□ -0.62
CTSA-205ENST00000419493 ARVCFO00192 962 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 NKRFO15226 690 aaKnown RBP eCLIP11.17□□□□□ -0.62
CTSA-205ENST00000419493 CTAGE5O15320 804 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 TLR3O15455 904 aaKnown RBP11.17□□□□□ -0.62
CTSA-205ENST00000419493 CABYRO75952 493 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 MYL3P08590 195 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 EDNRBP24530 442 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 SMARCA1P28370 1054 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 CPT1AP50416 773 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 FXR1P51114 621 aaKnown RBP eCLIP11.17□□□□□ -0.62
CTSA-205ENST00000419493 HSD17B4P51659 736 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 CHMP4BP1P59074 171 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 SGMS1Q86VZ5 419 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 SRBD1Q8N5C6 995 aaKnown RBP11.17□□□□□ -0.62
CTSA-205ENST00000419493 SAMD3Q8N6K7 520 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 SMARCC2Q8TAQ2 1214 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 COPS5Q92905 334 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 BADQ92934 168 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 JAKMIP1Q96N16 626 aaKnown RBP11.17□□□□□ -0.62
CTSA-205ENST00000419493 SPZ1Q9BXG8 430 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 PRO3102Q9H379 93 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 PDLIM7Q9NR12 457 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 PXMP2Q9NR77 195 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 LCTP09848 1927 aa11.17□□□□□ -0.62
CTSA-205ENST00000419493 hCG_1642624A0A1W2PR95 340 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 TRIM43BA6NCK2 446 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 OPLAHO14841 1288 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 ZBTB43O43298 467 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 EIF3JO75822 258 aaKnown RBP11.16□□□□□ -0.62
CTSA-205ENST00000419493 CPA1P15085 419 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 PSMA5P28066 241 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 HSPA4P34932 840 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 PSMC6P62333 389 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 EXOSC10Q01780 885 aaKnown RBP11.16□□□□□ -0.62
CTSA-205ENST00000419493 ITGA7Q13683 1181 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 LY6KQ17RY6 165 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 APOA5Q6Q788 366 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 BLOC1S2Q6QNY1 142 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 ANKRD33Q7Z3H0 272 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 TDHQ8IZJ6 230 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 TRIM43Q96BQ3 446 aaPredicted RBP11.16□□□□□ -0.62
CTSA-205ENST00000419493 TOX2Q96NM4 488 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 PDCD2LQ9BRP1 358 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 POLR3EQ9NVU0 708 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 RBM28Q9NW13 759 aaKnown RBP11.16□□□□□ -0.62
CTSA-205ENST00000419493 SNX14Q9Y5W7 946 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 MRVI1Q9Y6F6 885 aa11.16□□□□□ -0.62
CTSA-205ENST00000419493 KLF18A0A0U1RQI7 1052 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 GOLGA8AA7E2F4 631 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 GOLGA8BA8MQT2 603 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 GH1P01241 217 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 CCND2P30279 289 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 NKX3-2P78367 333 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 FAAP100Q0VG06 881 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 PGM5Q15124 567 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 RTN1Q16799 776 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 FAM47CQ5HY64 1035 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 Q6ZUG5 572 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
CTSA-205ENST00000419493 BRPF3Q9ULD4 1205 aa11.15□□□□□ -0.62
CTSA-205ENST00000419493 ARIH2O95376 493 aa11.14□□□□□ -0.63
CTSA-205ENST00000419493 SLC34A2O95436 690 aa11.14□□□□□ -0.63
CTSA-205ENST00000419493 CASTP20810 708 aaKnown RBP11.14□□□□□ -0.63
CTSA-205ENST00000419493 CDK7P50613 346 aa11.14□□□□□ -0.63
CTSA-205ENST00000419493 PURAQ00577 322 aaKnown RBP11.14□□□□□ -0.63
CTSA-205ENST00000419493 APOBRQ0VD83 1088 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms