RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 CYP7A1P22680 504 aa8.38□□□□□ -1.07
HMGN1-205ENST00000419378 FGD1P98174 961 aa8.38□□□□□ -1.07
HMGN1-205ENST00000419378 MAP3K12Q12852 859 aa8.38□□□□□ -1.07
HMGN1-205ENST00000419378 TTF1Q15361 905 aaPredicted RBP8.38□□□□□ -1.07
HMGN1-205ENST00000419378 ALG1LQ6GMV1 187 aa8.38□□□□□ -1.07
HMGN1-205ENST00000419378 ERO1BQ86YB8 467 aa8.38□□□□□ -1.07
HMGN1-205ENST00000419378 MAGEB6Q8N7X4 407 aa8.38□□□□□ -1.07
HMGN1-205ENST00000419378 FAM161BQ96MY7 647 aa8.38□□□□□ -1.07
HMGN1-205ENST00000419378 DNAJC2Q99543 621 aaKnown RBP8.38□□□□□ -1.07
HMGN1-205ENST00000419378 OSBPL5Q9H0X9 879 aaPredicted RBP8.38□□□□□ -1.07
HMGN1-205ENST00000419378 ZNF112Q9UJU3 913 aa8.38□□□□□ -1.07
HMGN1-205ENST00000419378 FLT1P17948 1338 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 DOCK1Q14185 1865 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 CCL15-CCL14A0A0B4J2E2 113 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 PHF20L1A8MW92 1017 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 TBC1D8O95759 1140 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 SLURP2P0DP57 97 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 ATP5JP18859 108 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 CES1P23141 567 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 INHBEP58166 350 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 DYNLL1P63167 89 aaKnown RBP8.37□□□□□ -1.07
HMGN1-205ENST00000419378 MAP3K10Q02779 954 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 PPIL2Q13356 520 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 CCL15Q16663 113 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 NOL9Q5SY16 702 aaKnown RBP8.37□□□□□ -1.07
HMGN1-205ENST00000419378 TMED8Q6PL24 325 aaPredicted RBP8.37□□□□□ -1.07
HMGN1-205ENST00000419378 MAPKAPK5Q8IW41 473 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 MIGA1Q8NAN2 632 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 BRI3BPQ8WY22 251 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 CCDC74AQ96AQ1 378 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 EDC3Q96F86 508 aaKnown RBP8.37□□□□□ -1.07
HMGN1-205ENST00000419378 PAG1Q9NWQ8 432 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 SIPA1L1O43166 1804 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 CENPFP49454 3210 aa8.37□□□□□ -1.07
HMGN1-205ENST00000419378 PDE6AP16499 860 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 IRS1P35568 1242 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 GTF2A2P52657 109 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 PPATQ06203 517 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 SLC9C2Q5TAH2 1124 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 SCYL3Q8IZE3 742 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 GPR161Q8N6U8 529 aaKnown RBP8.36□□□□□ -1.07
HMGN1-205ENST00000419378 OR13H1Q8NG92 308 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 EPS8L3Q8TE67 593 aaKnown RBP8.36□□□□□ -1.07
HMGN1-205ENST00000419378 FBF1Q8TES7 1133 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 TGFBRAP1Q8WUH2 860 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 HAUS7Q99871 368 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 PTPN18Q99952 460 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 RIOK1Q9BRS2 568 aaKnown RBP8.36□□□□□ -1.07
HMGN1-205ENST00000419378 BOLA2Q9H3K6 86 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 ECHDC1Q9NTX5 307 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 KANSL3Q9P2N6 904 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 PRR12Q9ULL5 1215 aa8.36□□□□□ -1.07
HMGN1-205ENST00000419378 DDX60LQ5H9U9 1706 aaKnown RBP8.36□□□□□ -1.07
HMGN1-205ENST00000419378 ZNF532Q9HCE3 1301 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 MYH7P12883 1935 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 NAV1Q8NEY1 1877 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 TCRBV5S4A2TA0A5A2 114 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 C2CD2LO14523 706 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 MAP3K6O95382 1288 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 CETPP11597 493 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 CRHR2Q13324 411 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 SNAPC2Q13487 334 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 GAS6Q14393 721 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.35□□□□□ -1.07
HMGN1-205ENST00000419378 TSHZ3Q63HK5 1081 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 ZNF787Q6DD87 383 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 OTUD7BQ6GQQ9 843 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 CERS3Q8IU89 383 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 FAM43AQ8N2R8 423 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 ZNF296Q8WUU4 475 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-205ENST00000419378 PMEPA1Q969W9 287 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 DHX36Q9H2U1 1008 aaKnown RBP8.35□□□□□ -1.07
HMGN1-205ENST00000419378 R3HDMLQ9H3Y0 253 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 EFCC1Q9HA90 598 aa8.35□□□□□ -1.07
HMGN1-205ENST00000419378 SAP30BPQ9UHR5 308 aaKnown RBP8.35□□□□□ -1.07
HMGN1-205ENST00000419378 HERC5Q9UII4 1024 aaKnown RBP8.35□□□□□ -1.07
HMGN1-205ENST00000419378 PHIPQ8WWQ0 1821 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 ATAD5Q96QE3 1844 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 H3BM21 787 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 PSAPP07602 524 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 BMP4P12644 408 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 PTPRAP18433 802 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 MX2P20592 715 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 DAB2P98082 770 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 PSMD2Q13200 908 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 HDAC1Q13547 482 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-205ENST00000419378 SLC4A8Q2Y0W8 1093 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 GPATCH3Q96I76 525 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.34□□□□□ -1.07
HMGN1-205ENST00000419378 MCOLN1Q9GZU1 580 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 DNAJC18Q9H819 358 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.34□□□□□ -1.07
HMGN1-205ENST00000419378 NPHS2Q9NP85 383 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 PICK1Q9NRD5 415 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-205ENST00000419378 PI4KBQ9UBF8 816 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 PALD1Q9ULE6 856 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 MYH1P12882 1939 aa8.34□□□□□ -1.07
HMGN1-205ENST00000419378 PTPRFP10586 1907 aa8.33□□□□□ -1.08
HMGN1-205ENST00000419378 BRCA2P51587 3418 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms