RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 KIAA0895Q8NCT3 520 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 RRP36Q96EU6 259 aaKnown RBP16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 NLRP3Q96P20 1036 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 TSGA10Q9BZW7 698 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 SEMA6BQ9H3T3 888 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 ARHGAP20Q9P2F6 1191 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 JRKLQ9Y4A0 524 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 FLT1P17948 1338 aa16.86■□□□□ 0.29
SEMA3B-203ENST00000419007 TDRD12Q587J7 1177 aaKnown RBP16.86■□□□□ 0.29
SEMA3B-203ENST00000419007 MARCH10Q8NA82 808 aaPredicted RBP16.86■□□□□ 0.29
SEMA3B-203ENST00000419007 LAD1O00515 517 aa16.86■□□□□ 0.29
SEMA3B-203ENST00000419007 LDHBP07195 334 aaKnown RBP16.86■□□□□ 0.29
SEMA3B-203ENST00000419007 TBC1D9BQ66K14 1250 aa16.86■□□□□ 0.29
SEMA3B-203ENST00000419007 CACNA2D4Q7Z3S7 1137 aa16.86■□□□□ 0.29
SEMA3B-203ENST00000419007 TBCKQ8TEA7 893 aa16.86■□□□□ 0.29
SEMA3B-203ENST00000419007 NDST4Q9H3R1 872 aa16.86■□□□□ 0.29
SEMA3B-203ENST00000419007 BUB1O43683 1085 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 ZPR1O75312 459 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 ENOX2Q16206 610 aaKnown RBP16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 NEK8Q86SG6 692 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 SLC51AQ86UW1 340 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 NBPF5PQ86XG9 351 aaPredicted RBP16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 CREG2Q8IUH2 290 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 ANKIB1Q9P2G1 1089 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 LRRC41Q15345 812 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 SV2BQ7L1I2 683 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 ALS2CR12Q96Q35 445 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 UBA5Q9GZZ9 404 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 CUEDC2Q9H467 287 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 C6orf50Q9HD87 102 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 SEC63Q9UGP8 760 aaKnown RBP16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 FAM184BQ9ULE4 1060 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 LRRC53A6NM62 1247 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 AGPSO00116 658 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 PPFIA4O75335 1185 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 RPS6KA5O75582 802 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 PRPHP41219 470 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 MAGEA1P43355 309 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 VWA3BQ502W6 1294 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 KRT25Q7Z3Z0 450 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 CCDC155Q8N6L0 562 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 SPATA4Q8NEY3 305 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 AK8Q96MA6 479 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 ERGIC2Q96RQ1 377 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 NLRC4Q9NPP4 1024 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 TMEM260Q9NX78 707 aa16.85■□□□□ 0.29
SEMA3B-203ENST00000419007 MYH14Q7Z406 1995 aaKnown RBP16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 GALNT17Q6IS24 598 aa16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 FNBP4Q8N3X1 1017 aaPredicted RBP16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 UIMC1Q96RL1 719 aa16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 RUFY1Q96T51 708 aa16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 C7orf25Q9BPX7 421 aa16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 SH2D4AQ9H788 454 aa16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 PLAGL2Q9UPG8 496 aa16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 ZC3H4Q9UPT8 1303 aaKnown RBP16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 RASSF7Q02833 373 aa16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 SPTY2D1Q68D10 685 aaPredicted RBP16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 OSBPL9Q96SU4 736 aa16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 EHD4Q9H223 541 aa16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 QTRT2Q9H974 415 aaKnown RBP16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 A0A1B0GUL6 1792 aa16.84■□□□□ 0.29
SEMA3B-203ENST00000419007 PAFAH1B1P43034 410 aa16.83■□□□□ 0.29
SEMA3B-203ENST00000419007 GFPT1Q06210 699 aaPredicted RBP16.83■□□□□ 0.29
SEMA3B-203ENST00000419007 ZNF662Q6ZS27 426 aa16.83■□□□□ 0.29
SEMA3B-203ENST00000419007 GPR101Q96P66 508 aaPredicted RBP16.83■□□□□ 0.29
SEMA3B-203ENST00000419007 SSBP05455 408 aaKnown RBP eCLIP16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 GNA11P29992 359 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 CLEC4GQ6UXB4 293 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 DAGLBQ8NCG7 672 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 PIGSQ96S52 555 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 SRP68Q9UHB9 627 aaKnown RBP16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 MYMKA6NI61 221 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 CCT5P48643 541 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 ARID5AQ03989 594 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 GRIK5Q16478 980 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 TMC4Q7Z404 712 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 PURBQ96QR8 312 aaKnown RBP16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 ANKRD2Q9GZV1 360 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 ZMYND12Q9H0C1 365 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 MAGEF1Q9HAY2 307 aa16.83■□□□□ 0.28
SEMA3B-203ENST00000419007 PALM3A6NDB9 673 aaPredicted RBP16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 POTEMA6NI47 508 aa16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 RNASE9P60153 205 aaKnown RBP16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 VPS72Q15906 364 aa16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 ZSCAN29Q8IWY8 852 aaPredicted RBP16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 REXO1Q8N1G1 1221 aaKnown RBP16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 MS4A14Q96JA4 679 aa16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 SETDB2Q96T68 719 aa16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 MMTAG2Q9BU76 263 aaKnown RBP16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 BAG3O95817 575 aa16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 TMED8Q6PL24 325 aaPredicted RBP16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 GLIS3Q8NEA6 775 aa16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 EYA3Q99504 573 aa16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 POLD4Q9HCU8 107 aa16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 HYOU1Q9Y4L1 999 aa16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 COL14A1Q05707 1796 aaKnown RBP16.82■□□□□ 0.28
SEMA3B-203ENST00000419007 A0A1W2PQJ5 194 aa16.81■□□□□ 0.28
SEMA3B-203ENST00000419007 CALCRLQ16602 461 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms