RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZC3H12DA2A288 527 aaKnown RBP6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 FUCA1P04066 466 aa6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 C8AP07357 584 aa6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 LTBRP36941 435 aa6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 BCL6P41182 706 aa6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 KCNAB2Q13303 367 aa6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 CBX2Q14781 532 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 SOGA3Q5TF21 947 aa6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 USP53Q70EK8 1073 aa6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 FAM84AQ96KN4 292 aa6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 KANSL2Q9H9L4 492 aa6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 PPARGC1AQ9UBK2 798 aaKnown RBP6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 SIT1Q9Y3P8 196 aa6.89□□□□□ -1.31
HMGB1P49-201ENST00000418882 ETV2O00321 342 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 PEX10O60683 326 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 MPOP05164 745 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 C6orf222P0C671 652 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 EPHB3P54753 998 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 IFRD2Q12894 506 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 TMC6Q7Z403 805 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 Q8N1Y9 231 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 JMYQ8N9B5 988 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 CDIP1Q9H305 208 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 BCAS3Q9H6U6 928 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 ZSWIM4Q9H7M6 989 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 CNTD2Q9H8S5 307 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 PCDHA2Q9Y5H9 948 aa6.88□□□□□ -1.31
HMGB1P49-201ENST00000418882 NTRK1P04629 796 aa6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 CYBBP04839 570 aa6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 C1QTNF9P0C862 333 aa6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 TXKP42681 527 aa6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 SRSF3P84103 164 aaKnown RBP6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 WWC2Q6AWC2 1192 aa6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 IQCEQ6IPM2 695 aa6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 PAQR3Q6TCH7 311 aa6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 DPH6Q7L8W6 267 aa6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 CILP2Q8IUL8 1156 aa6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 PHF20Q9BVI0 1012 aa6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 TIMM13Q9Y5L4 95 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P49-201ENST00000418882 TEX51A0A1B0GUA7 166 aa6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 A0A1W2PQJ5 194 aa6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 C22orf46C9J442 243 aa6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 F8W031 263 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 HRKO00198 91 aa6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 FBLN1P23142 703 aa6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 MAPKAPK2P49137 400 aa6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 CDR1P51861 262 aa6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 RPL11P62913 178 aaKnown RBP6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 KISS1RQ969F8 398 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 SLC26A8Q96RN1 970 aa6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 TRAF6Q9Y4K3 522 aa6.86□□□□□ -1.31
HMGB1P49-201ENST00000418882 TRBV23-1A0A0A0MS06 115 aa6.85□□□□□ -1.31
HMGB1P49-201ENST00000418882 MED14OSP0DP75 135 aa6.85□□□□□ -1.31
HMGB1P49-201ENST00000418882 NCKAP1LP55160 1127 aa6.85□□□□□ -1.31
HMGB1P49-201ENST00000418882 DLG4P78352 724 aa6.85□□□□□ -1.31
HMGB1P49-201ENST00000418882 PRR5P85299 388 aa6.85□□□□□ -1.31
HMGB1P49-201ENST00000418882 ZNF200P98182 395 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P49-201ENST00000418882 CEP68Q76N32 757 aa6.85□□□□□ -1.31
HMGB1P49-201ENST00000418882 USP33Q8TEY7 942 aa6.85□□□□□ -1.31
HMGB1P49-201ENST00000418882 GPR27Q9NS67 375 aa6.85□□□□□ -1.31
HMGB1P49-201ENST00000418882 X6R8D5 127 aa6.85□□□□□ -1.31
HMGB1P49-201ENST00000418882 TSPAN15O95858 294 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 SQSTM1Q13501 440 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 NR1I3Q14994 352 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 C2orf27AQ580R0 203 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 STYK1Q6J9G0 422 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 NETO2Q8NC67 525 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 DCAF4Q8WV16 495 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 KCNN1Q92952 543 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 CDC6Q99741 560 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 CD320Q9NPF0 282 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 MRPS23Q9Y3D9 190 aaKnown RBP6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 PCDHA5Q9Y5H7 936 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 PTCH2Q9Y6C5 1203 aa6.84□□□□□ -1.31
HMGB1P49-201ENST00000418882 SGSM2O43147 1006 aa6.83□□□□□ -1.32
HMGB1P49-201ENST00000418882 SEMA7AO75326 666 aa6.83□□□□□ -1.32
HMGB1P49-201ENST00000418882 GLDCP23378 1020 aa6.83□□□□□ -1.32
HMGB1P49-201ENST00000418882 LSAMPQ13449 338 aa6.83□□□□□ -1.32
HMGB1P49-201ENST00000418882 ZC3H14Q6PJT7 736 aaKnown RBP6.83□□□□□ -1.32
HMGB1P49-201ENST00000418882 ATG14Q6ZNE5 492 aa6.83□□□□□ -1.32
HMGB1P49-201ENST00000418882 LDHDQ86WU2 507 aa6.83□□□□□ -1.32
HMGB1P49-201ENST00000418882 IGDCC3Q8IVU1 814 aa6.83□□□□□ -1.32
HMGB1P49-201ENST00000418882 SCUBE1Q8IWY4 988 aa6.83□□□□□ -1.32
HMGB1P49-201ENST00000418882 CLDND1Q9NY35 253 aa6.83□□□□□ -1.32
HMGB1P49-201ENST00000418882 IRS2Q9Y4H2 1338 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 ABLIM1O14639 778 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 SUMO1P63165 101 aaKnown RBP6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 SSPNQ14714 243 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 NFE2L2Q16236 605 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 LONRF2Q1L5Z9 754 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 TMEM132EQ6IEE7 984 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 RSPO2Q6UXX9 243 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 LBX2Q6XYB7 198 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 RIOX2Q8IUF8 465 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 THAP3Q8WTV1 239 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 TRMT2BQ96GJ1 504 aaKnown RBP6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 TMEM169Q96HH4 297 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 CHAMP1Q96JM3 812 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms