RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SPAG1Q07617 926 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 USP17L24Q0WX57 530 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 PAK1Q13153 545 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 RASA3Q14644 834 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 KMT5BQ4FZB7 885 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 Q4G0T1 1027 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 ARMCX5Q6P1M9 558 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 FOXR2Q6PJQ5 311 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 USP17L6PQ6QN14 398 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 SLFN12Q8IYM2 578 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 GIMAP8Q8ND71 665 aaPredicted RBP10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 ETNPPLQ8TBG4 499 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 STAMQ92783 540 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 NAP1L5Q96NT1 182 aaPredicted RBP10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 P2RX7Q99572 595 aaKnown RBP10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 SAMSN1Q9NSI8 373 aaKnown RBP10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 FEM1BQ9UK73 627 aa10.18□□□□□ -0.78
LINCMD1-201ENST00000418518 OTOFQ9HC10 1997 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 PVALEFA0A1B0GWK0 134 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 TXKP42681 527 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 PRCPP42785 496 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 GMPSP49915 693 aaPredicted RBP10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 ARHGAP4P98171 946 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 EHHADHQ08426 723 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 ARID5BQ14865 1188 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 NR1I3Q14994 352 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 R3HDM1Q15032 1099 aaKnown RBP10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 FAM83BQ5T0W9 1011 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 KRT79Q5XKE5 535 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 FILIP1Q7Z7B0 1213 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 MICALL2Q8IY33 904 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 SMYD4Q8IYR2 804 aaPredicted RBP10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 CCDC112Q8NEF3 446 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 RASSF8Q8NHQ8 419 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 LPAR1Q92633 364 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 RAD54LQ92698 747 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 LENG9Q96B70 501 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 CTAGE1Q96RT6 745 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 KIAA1683Q9H0B3 1180 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 TMX1Q9H3N1 280 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 ADD3Q9UEY8 706 aaKnown RBP10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 LIMA1Q9UHB6 759 aaKnown RBP10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 CTNND2Q9UQB3 1225 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 BCS1LQ9Y276 419 aa10.17□□□□□ -0.78
LINCMD1-201ENST00000418518 ABCB11O95342 1321 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 ITIH6Q6UXX5 1313 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 MYH11P35749 1972 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 POTEMA6NI47 508 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 WDR46O15213 610 aaKnown RBP10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 CTNND1O60716 968 aaKnown RBP10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 EGFRP00533 1210 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 SFPQP23246 707 aaKnown RBP eCLIP10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 RASSF7Q02833 373 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 SPIRE1Q08AE8 756 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 IKQ13123 557 aaPredicted RBP10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 STIM1Q13586 685 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 UNC13DQ70J99 1090 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 SV2BQ7L1I2 683 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 C17orf53Q8N3J3 647 aaPredicted RBP10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 KCTD17Q8N5Z5 321 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 SNX29Q8TEQ0 813 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 NELFBQ8WX92 580 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 LARP4BQ92615 738 aaKnown RBP10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 CCDC47Q96A33 483 aaKnown RBP10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 DHTKD1Q96HY7 919 aaPredicted RBP10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 FAM20AQ96MK3 541 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 LRRC27Q9C0I9 530 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 NT5C3AQ9H0P0 336 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 ZNF112Q9UJU3 913 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 GDAQ9Y2T3 454 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 STK24Q9Y6E0 443 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 A0A0G2JMZ2 1700 aa10.16□□□□□ -0.78
LINCMD1-201ENST00000418518 ZNF541Q9H0D2 1346 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 PSDA5PKW4 1024 aaPredicted RBP10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 MYMKA6NI61 221 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 SPDYE3A6NKU9 549 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 H7C1D1 291 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 RAD21O60216 631 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 SKILP12757 684 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 CDK11BP21127 795 aaKnown RBP10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 CCNE1P24864 410 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 KIF4BQ2VIQ3 1234 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 SPECC1LQ69YQ0 1117 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 KLHL10Q6JEL2 608 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 TTI2Q6NXR4 508 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 MIGA2Q7L4E1 593 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 FCHSD1Q86WN1 690 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 SPICE1Q8N0Z3 855 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 SAMD3Q8N6K7 520 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 NOC3LQ8WTT2 800 aaKnown RBP10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 HOOK2Q96ED9 719 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 CDK5RAP3Q96JB5 506 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 GLIS2Q9BZE0 524 aaPredicted RBP10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 THAP9Q9H5L6 903 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 EXOC1Q9NV70 894 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 CNOT7Q9UIV1 285 aaKnown RBP10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 PCDHA12Q9UN75 941 aa10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 MRPL11Q9Y3B7 192 aaKnown RBP10.15□□□□□ -0.78
LINCMD1-201ENST00000418518 LCTP09848 1927 aa10.15□□□□□ -0.79
LINCMD1-201ENST00000418518 FRMPD4Q14CM0 1322 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms