RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 AGTPBP1Q9UPW5 1226 aa23.53■■□□□ 1.36
CASC3-203ENST00000418132 POLR2DO15514 142 aaKnown RBP23.52■■□□□ 1.36
CASC3-203ENST00000418132 LONRF3Q496Y0 759 aa23.52■■□□□ 1.36
CASC3-203ENST00000418132 KRBA2Q6ZNG9 492 aa23.52■■□□□ 1.36
CASC3-203ENST00000418132 FASTKD5Q7L8L6 764 aaKnown RBP23.52■■□□□ 1.36
CASC3-203ENST00000418132 ELOA2Q8IYF1 753 aaPredicted RBP23.52■■□□□ 1.36
CASC3-203ENST00000418132 TRERF1Q96PN7 1200 aa23.52■■□□□ 1.36
CASC3-203ENST00000418132 TSPY26PQ9H489 355 aa23.52■■□□□ 1.36
CASC3-203ENST00000418132 HOMER2Q9NSB8 354 aa23.52■■□□□ 1.36
CASC3-203ENST00000418132 RIPK3Q9Y572 518 aa23.52■■□□□ 1.36
CASC3-203ENST00000418132 CELF2O95319 508 aaKnown RBP23.52■■□□□ 1.36
CASC3-203ENST00000418132 SNRNP48Q6IEG0 339 aaKnown RBP23.52■■□□□ 1.36
CASC3-203ENST00000418132 C2orf69Q8N8R5 385 aa23.52■■□□□ 1.36
CASC3-203ENST00000418132 AK8Q96MA6 479 aa23.52■■□□□ 1.36
CASC3-203ENST00000418132 TEX13BQ9BXU2 312 aa23.52■■□□□ 1.36
CASC3-203ENST00000418132 EHMT1Q9H9B1 1298 aa23.52■■□□□ 1.36
CASC3-203ENST00000418132 ITGBL1O95965 494 aaPredicted RBP23.51■■□□□ 1.35
CASC3-203ENST00000418132 CHADLQ6NUI6 762 aa23.51■■□□□ 1.35
CASC3-203ENST00000418132 LBX2Q6XYB7 198 aa23.51■■□□□ 1.35
CASC3-203ENST00000418132 RNF146Q9NTX7 359 aa23.51■■□□□ 1.35
CASC3-203ENST00000418132 A0A087X0B3 334 aa23.51■■□□□ 1.35
CASC3-203ENST00000418132 FXR2P51116 673 aaKnown RBP eCLIP23.51■■□□□ 1.353e-6■■□□□ 14.2
CASC3-203ENST00000418132 SNAPC2Q13487 334 aa23.51■■□□□ 1.35
CASC3-203ENST00000418132 TKFCQ3LXA3 575 aa23.51■■□□□ 1.35
CASC3-203ENST00000418132 Q4G0T1 1027 aa23.51■■□□□ 1.35
CASC3-203ENST00000418132 IGSF22Q8N9C0 903 aa23.51■■□□□ 1.35
CASC3-203ENST00000418132 HAS1Q92839 578 aa23.51■■□□□ 1.35
CASC3-203ENST00000418132 CCDC192P0DO97 292 aa23.5■■□□□ 1.35
CASC3-203ENST00000418132 TXKP42681 527 aa23.5■■□□□ 1.35
CASC3-203ENST00000418132 POTEEQ6S8J3 1075 aa23.5■■□□□ 1.35
CASC3-203ENST00000418132 PDILTQ8N807 584 aa23.5■■□□□ 1.35
CASC3-203ENST00000418132 MB21D1Q8N884 522 aa23.5■■□□□ 1.35
CASC3-203ENST00000418132 CNNM3Q8NE01 707 aa23.5■■□□□ 1.35
CASC3-203ENST00000418132 KCNMB3Q9NPA1 279 aa23.5■■□□□ 1.35
CASC3-203ENST00000418132 COL20A1Q9P218 1284 aa23.5■■□□□ 1.35
CASC3-203ENST00000418132 IRX3P78415 501 aaPredicted RBP23.49■■□□□ 1.35
CASC3-203ENST00000418132 LENG9Q96B70 501 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 PYM1Q9BRP8 204 aaKnown RBP23.49■■□□□ 1.35
CASC3-203ENST00000418132 CCSER1Q9C0I3 900 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 ASCC2Q9H1I8 757 aaPredicted RBP23.49■■□□□ 1.35
CASC3-203ENST00000418132 RPTORQ8N122 1335 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 FAM86B1E9PN63 330 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 ACTN4O43707 911 aaKnown RBP23.49■■□□□ 1.35
CASC3-203ENST00000418132 FAM86B2P0C5J1 330 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 TXLNAP40222 546 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 STAT3P40763 770 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 TECP42680 631 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 GPAT2Q6NUI2 795 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 SYTL5Q8TDW5 730 aaPredicted RBP23.49■■□□□ 1.35
CASC3-203ENST00000418132 MAF1Q9H063 256 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 USP25Q9UHP3 1055 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 SERTAD1Q9UHV2 236 aa23.49■■□□□ 1.35
CASC3-203ENST00000418132 CDC25AP30304 524 aa23.48■■□□□ 1.35
CASC3-203ENST00000418132 RPS6P62753 249 aaKnown RBP23.48■■□□□ 1.35
CASC3-203ENST00000418132 PABPC4Q13310 644 aaKnown RBP eCLIP23.48■■□□□ 1.35
CASC3-203ENST00000418132 PDIA5Q14554 519 aa23.48■■□□□ 1.35
CASC3-203ENST00000418132 TMEM266Q2M3C6 531 aa23.48■■□□□ 1.35
CASC3-203ENST00000418132 CST9Q5W186 159 aa23.48■■□□□ 1.35
CASC3-203ENST00000418132 RBSNQ9H1K0 784 aa23.48■■□□□ 1.35
CASC3-203ENST00000418132 KIAA1468Q9P260 1216 aa23.48■■□□□ 1.35
CASC3-203ENST00000418132 RABGAP1Q9Y3P9 1069 aa23.48■■□□□ 1.35
CASC3-203ENST00000418132 PP2D1A8MPX8 630 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 TBX3O15119 743 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 TYRO3Q06418 890 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 SASS6Q6UVJ0 657 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 RNF207Q6ZRF8 634 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 DHX58Q96C10 678 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 TTC12Q9H892 705 aaPredicted RBP23.47■■□□□ 1.35
CASC3-203ENST00000418132 TRPM7Q96QT4 1865 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 FRMPD4Q14CM0 1322 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 SLFN14P0C7P3 912 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 UBA7P41226 1012 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 E2F4Q16254 413 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 PRR16Q569H4 304 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 KANK3Q6NY19 840 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 ETNPPLQ8TBG4 499 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 RAB34Q9BZG1 259 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 BTBD7Q9P203 1132 aa23.47■■□□□ 1.35
CASC3-203ENST00000418132 IGLV3-22A0A075B6J6 115 aa23.46■■□□□ 1.35
CASC3-203ENST00000418132 HERVK_113P62684 666 aa23.46■■□□□ 1.35
CASC3-203ENST00000418132 MDM2Q00987 491 aaPredicted RBP23.46■■□□□ 1.35
CASC3-203ENST00000418132 SLC30A10Q6XR72 485 aa23.46■■□□□ 1.35
CASC3-203ENST00000418132 IQUBQ8NA54 791 aa23.46■■□□□ 1.35
CASC3-203ENST00000418132 ACAD9Q9H845 621 aa23.46■■□□□ 1.35
CASC3-203ENST00000418132 HOOK1Q9UJC3 728 aaKnown RBP23.46■■□□□ 1.35
CASC3-203ENST00000418132 ZNF76P36508 570 aa23.45■■□□□ 1.35
CASC3-203ENST00000418132 PLS1Q14651 629 aa23.45■■□□□ 1.35
CASC3-203ENST00000418132 NSMFQ6X4W1 530 aa23.45■■□□□ 1.35
CASC3-203ENST00000418132 SLFN12Q8IYM2 578 aa23.45■■□□□ 1.35
CASC3-203ENST00000418132 ERCC4Q92889 916 aaPredicted RBP23.45■■□□□ 1.35
CASC3-203ENST00000418132 MS4A4AQ96JQ5 239 aa23.45■■□□□ 1.35
CASC3-203ENST00000418132 PCDHA12Q9UN75 941 aa23.45■■□□□ 1.35
CASC3-203ENST00000418132 MARCH6O60337 910 aa23.45■■□□□ 1.34
CASC3-203ENST00000418132 OSBPP22059 807 aa23.45■■□□□ 1.34
CASC3-203ENST00000418132 FAM20AQ96MK3 541 aa23.45■■□□□ 1.34
CASC3-203ENST00000418132 DISC1Q9NRI5 854 aa23.45■■□□□ 1.34
CASC3-203ENST00000418132 LRWD1Q9UFC0 647 aa23.45■■□□□ 1.34
CASC3-203ENST00000418132 CETPP11597 493 aa23.44■■□□□ 1.34
CASC3-203ENST00000418132 GTF2A2P52657 109 aa23.44■■□□□ 1.34
CASC3-203ENST00000418132 UBXN2AP68543 259 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms