RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 BICRALQ6AI39 1079 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 VHLLQ6RSH7 139 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 SIAH1Q8IUQ4 282 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 PPP1R14AQ96A00 147 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 SIGLEC10Q96LC7 697 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 CNTD2Q9H8S5 307 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 CAPN10Q9HC96 672 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 KLHL14Q9P2G3 628 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 SYCP2Q9BX26 1530 aa5.48□□□□□ -1.53
HMGB3P20-201ENST00000417997 SHANK2Q9UPX8 1470 aa5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 A0A087WZG4 1122 aa5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 HRKO00198 91 aa5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 ERCC5P28715 1186 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 SEPHS1P49903 392 aa5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 RPTNQ6XPR3 784 aa5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 FAM169BQ8N8A8 192 aa5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 KLHL6Q8WZ60 621 aa5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 TNFRSF12AQ9NP84 129 aa5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 CFDP1Q9UEE9 299 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 CGGBP1Q9UFW8 167 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 DBR1Q9UK59 544 aaKnown RBP5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 HFM1A2PYH4 1435 aa5.47□□□□□ -1.53
HMGB3P20-201ENST00000417997 CCDC141Q6ZP82 1450 aa5.46□□□□□ -1.53
HMGB3P20-201ENST00000417997 PLEKHH2Q8IVE3 1493 aa5.46□□□□□ -1.53
HMGB3P20-201ENST00000417997 L1CAMP32004 1257 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 CDR1P51861 262 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 NCKAP1LP55160 1127 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 AMPD2Q01433 879 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 PANK1Q8TE04 598 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 MZB1Q8WU39 189 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 PDLIM7Q9NR12 457 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 STRIP2Q9ULQ0 834 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 MRVI1Q9Y6F6 885 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 ABCC1P33527 1531 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 ARAP3Q8WWN8 1544 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 MAST1Q9Y2H9 1570 aa5.46□□□□□ -1.54
HMGB3P20-201ENST00000417997 DHX57Q6P158 1386 aaKnown RBP5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 C2orf71A6NGG8 1288 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 N4BP3O15049 544 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 SSBP05455 408 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 BMP7P18075 431 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 CASP7P55210 303 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 ZNF200P98182 395 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 NR1I3Q14994 352 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 PLEKHN1Q494U1 663 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 TCERG1LQ5VWI1 586 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 EEF1DP3Q658K8 133 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 RCSD1Q6JBY9 416 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 ZC3H14Q6PJT7 736 aaKnown RBP5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 AMIGO3Q86WK7 504 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 LDHDQ86WU2 507 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 VPS37DQ86XT2 251 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 TMEM151BQ8IW70 566 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 MCMBPQ9BTE3 642 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 AKT3Q9Y243 479 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 BACE2Q9Y5Z0 518 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 ABCC5O15440 1437 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 PTPRKQ15262 1439 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 PLXNC1O60486 1568 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 ADGRL2O95490 1459 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 KDM6BO15054 1643 aa5.45□□□□□ -1.54
HMGB3P20-201ENST00000417997 ROCK1Q13464 1354 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 ANKRD34BA5PLL1 514 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 AURKAO14965 403 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 KCNH1O95259 989 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 INHBBP09529 407 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 NAIPQ13075 1403 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 LARP1BQ659C4 914 aaKnown RBP5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 ASXL2Q76L83 1435 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 CPNE8Q86YQ8 564 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 ARHGEF39Q8N4T4 335 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 APBA2Q99767 749 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 ZCCHC4Q9H5U6 513 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 APEX2Q9UBZ4 518 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 SUSD2Q9UGT4 822 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 CLSPNQ9HAW4 1339 aa5.44□□□□□ -1.54
HMGB3P20-201ENST00000417997 MAPKBP1O60336 1514 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 ANKRD30AQ9BXX3 1397 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 C9orf84Q5VXU9 1444 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 F8W031 263 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 NOP56O00567 594 aaKnown RBP5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 SMAD7O15105 426 aaKnown RBP5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 CYBBP04839 570 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 DBHP09172 617 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 NAT2P11245 290 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 MAPKAPK2P49137 400 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 AFF3P51826 1226 aaKnown RBP5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 GNL2Q13823 731 aaKnown RBP5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 CBX2Q14781 532 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 CNKSR3Q6P9H4 555 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 PAQR3Q6TCH7 311 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 CABP7Q86V35 215 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 USP33Q8TEY7 942 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 ZNF428Q96B54 188 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 RXFP1Q9HBX9 757 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 RWDD3Q9Y3V2 267 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 HCFC2Q9Y5Z7 792 aa5.43□□□□□ -1.54
HMGB3P20-201ENST00000417997 PLCH2O75038 1416 aa5.42□□□□□ -1.54
HMGB3P20-201ENST00000417997 MAP3K4Q9Y6R4 1608 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms