RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ZNF500O60304 480 aaPredicted RBP18.89■□□□□ 0.61
SSBP3-205ENST00000417664 ICAM1P05362 532 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 LMOD1P29536 600 aaPredicted RBP18.89■□□□□ 0.61
SSBP3-205ENST00000417664 CDK5RAP3Q96JB5 506 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 FAM20AQ96MK3 541 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 SYT17Q9BSW7 474 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 PICK1Q9NRD5 415 aa18.89■□□□□ 0.61
SSBP3-205ENST00000417664 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.89■□□□□ 0.61
SSBP3-205ENST00000417664 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.89■□□□□ 0.613e-6■■■□□ 18
SSBP3-205ENST00000417664 KDM3AQ9Y4C1 1321 aa18.88■□□□□ 0.61
SSBP3-205ENST00000417664 INPP5BP32019 993 aa18.88■□□□□ 0.61
SSBP3-205ENST00000417664 EPS15P42566 896 aa18.88■□□□□ 0.61
SSBP3-205ENST00000417664 FANCCQ00597 558 aa18.88■□□□□ 0.61
SSBP3-205ENST00000417664 LDHDQ86WU2 507 aa18.88■□□□□ 0.61
SSBP3-205ENST00000417664 C7orf25Q9BPX7 421 aa18.88■□□□□ 0.61
SSBP3-205ENST00000417664 NT5C3AQ9H0P0 336 aa18.88■□□□□ 0.61
SSBP3-205ENST00000417664 BLZF1Q9H2G9 400 aa18.88■□□□□ 0.61
SSBP3-205ENST00000417664 ADARB2Q9NS39 739 aaKnown RBP18.88■□□□□ 0.61
SSBP3-205ENST00000417664 IMPACTQ9P2X3 320 aa18.88■□□□□ 0.61
SSBP3-205ENST00000417664 RABGAP1Q9Y3P9 1069 aa18.88■□□□□ 0.61
SSBP3-205ENST00000417664 PPP1R2P41236 205 aa18.87■□□□□ 0.61
SSBP3-205ENST00000417664 BACE1P56817 501 aa18.87■□□□□ 0.61
SSBP3-205ENST00000417664 HYIQ5T013 277 aa18.87■□□□□ 0.61
SSBP3-205ENST00000417664 SPATA1Q5VX52 437 aa18.87■□□□□ 0.61
SSBP3-205ENST00000417664 CCDC174Q6PII3 467 aa18.87■□□□□ 0.61
SSBP3-205ENST00000417664 STAMQ92783 540 aa18.87■□□□□ 0.61
SSBP3-205ENST00000417664 WRNIP1Q96S55 665 aa18.87■□□□□ 0.61
SSBP3-205ENST00000417664 MAP3K20Q9NYL2 800 aaKnown RBP18.87■□□□□ 0.61
SSBP3-205ENST00000417664 NFE2L3Q9Y4A8 694 aa18.87■□□□□ 0.61
SSBP3-205ENST00000417664 PPP1R3GB7ZBB8 358 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 C19orf81C9J6K1 198 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 RHOBTB3O94955 611 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 ZNF18P17022 549 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 CASP1P29466 404 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 HIRAP54198 1017 aaPredicted RBP18.86■□□□□ 0.61
SSBP3-205ENST00000417664 FMR1Q06787 632 aaKnown RBP eCLIP18.86■□□□□ 0.61
SSBP3-205ENST00000417664 GRB10Q13322 594 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 NOL9Q5SY16 702 aaKnown RBP18.86■□□□□ 0.61
SSBP3-205ENST00000417664 SV2BQ7L1I2 683 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 CCDC84Q86UT8 332 aaPredicted RBP18.86■□□□□ 0.61
SSBP3-205ENST00000417664 ZNF280CQ8ND82 737 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 SNX29Q8TEQ0 813 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 KLRG1Q96E93 195 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 P2RX7Q99572 595 aaKnown RBP18.86■□□□□ 0.61
SSBP3-205ENST00000417664 FBXO28Q9NVF7 368 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 FANCLQ9NW38 375 aa18.86■□□□□ 0.61
SSBP3-205ENST00000417664 CFBP00751 764 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 PTPRAP18433 802 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 GSDMDP57764 484 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 GHRHRQ02643 423 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 TMEM119Q4V9L6 283 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 CNNM4Q6P4Q7 775 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 MCF2L2Q86YR7 1114 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 ETNPPLQ8TBG4 499 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 C12orf42Q96LP6 360 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 TRIM9Q9C026 710 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 XPO4Q9C0E2 1151 aaKnown RBP18.85■□□□□ 0.61
SSBP3-205ENST00000417664 RNF181Q9P0P0 153 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 IFNKQ9P0W0 207 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 POTEMA6NI47 508 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 SERPINC1P01008 464 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 VCAM1P19320 739 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 HOXA13P31271 388 aaPredicted RBP18.85■□□□□ 0.61
SSBP3-205ENST00000417664 UBASH3AP57075 661 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 MTMR2Q13614 643 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 CCDC186Q7Z3E2 898 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 KCTD17Q8N5Z5 321 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 LARP4BQ92615 738 aaKnown RBP18.85■□□□□ 0.61
SSBP3-205ENST00000417664 SLC38A10Q9HBR0 1119 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 EMILIN3Q9NT22 766 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 RWDD2AQ9UIY3 292 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 CCPG1Q9ULG6 757 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 PPP1R9AQ9ULJ8 1098 aa18.85■□□□□ 0.61
SSBP3-205ENST00000417664 KLRC4O43908 158 aa18.84■□□□□ 0.61
SSBP3-205ENST00000417664 SPP2Q13103 211 aa18.84■□□□□ 0.61
SSBP3-205ENST00000417664 STIM1Q13586 685 aa18.84■□□□□ 0.61
SSBP3-205ENST00000417664 PRR16Q569H4 304 aa18.84■□□□□ 0.61
SSBP3-205ENST00000417664 HAUS3Q68CZ6 603 aa18.84■□□□□ 0.61
SSBP3-205ENST00000417664 LENG9Q96B70 501 aa18.84■□□□□ 0.61
SSBP3-205ENST00000417664 PNMA5Q96PV4 448 aa18.84■□□□□ 0.61
SSBP3-205ENST00000417664 PLIN2Q99541 437 aa18.84■□□□□ 0.61
SSBP3-205ENST00000417664 ZNF536O15090 1300 aa18.84■□□□□ 0.61
SSBP3-205ENST00000417664 SYNRGQ9UMZ2 1314 aa18.84■□□□□ 0.61
SSBP3-205ENST00000417664 PVALEFA0A1B0GWK0 134 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 DDNO94850 711 aaPredicted RBP18.83■□□□□ 0.61
SSBP3-205ENST00000417664 ATP1A3P13637 1013 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 CD44P16070 742 aaKnown RBP18.83■□□□□ 0.61
SSBP3-205ENST00000417664 ZNF76P36508 570 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 HSD17B4P51659 736 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 PAK1Q13153 545 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 KMT5BQ4FZB7 885 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 ERMNQ8TAM6 284 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 LRRC15Q8TF66 581 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 RAD54LQ92698 747 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 TANGO6Q9C0B7 1094 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 BLOC1S4Q9NUP1 217 aa18.83■□□□□ 0.61
SSBP3-205ENST00000417664 FAM86B1E9PN63 330 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 ZBED4O75132 1171 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 FLOT1O75955 427 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 FAM86B2P0C5J1 330 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms