RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 TLR7Q9NYK1 1049 aaKnown RBP9.89□□□□□ -0.83
SP140-204ENST00000417495 EGFL7Q9UHF1 273 aa9.89□□□□□ -0.83
SP140-204ENST00000417495 MYH15Q9Y2K3 1946 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 ATXN2Q99700 1313 aaKnown RBP9.88□□□□□ -0.83
SP140-204ENST00000417495 ERICH2A1L162 156 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 SFI1A8K8P3 1242 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 RNF113AO15541 343 aaKnown RBP9.88□□□□□ -0.83
SP140-204ENST00000417495 COL9A1P20849 921 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 ATICP31939 592 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 ALX1Q15699 326 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 CCDC158Q5M9N0 1113 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 THEMIS2Q5TEJ8 643 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 FERMT3Q86UX7 667 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 NKX2-3Q8TAU0 364 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 DHTKD1Q96HY7 919 aaPredicted RBP9.88□□□□□ -0.83
SP140-204ENST00000417495 CDC5LQ99459 802 aaKnown RBP9.88□□□□□ -0.83
SP140-204ENST00000417495 GORASP1Q9BQQ3 440 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 DBNDD2Q9BQY9 259 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 SLC39A3Q9BRY0 314 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 ZNF408Q9H9D4 720 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 ZCCHC17Q9NP64 241 aaKnown RBP9.88□□□□□ -0.83
SP140-204ENST00000417495 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.88□□□□□ -0.83
SP140-204ENST00000417495 MTRF1O75570 445 aaKnown RBP9.88□□□□□ -0.83
SP140-204ENST00000417495 FDX1P10109 184 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 HCLS1P14317 486 aaPredicted RBP9.88□□□□□ -0.83
SP140-204ENST00000417495 ENPP1P22413 925 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 RPS6KB1P23443 525 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 LIG3P49916 1009 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 PSMD7P51665 324 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 PTH1RQ03431 593 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 SF3B3Q15393 1217 aaKnown RBP9.88□□□□□ -0.83
SP140-204ENST00000417495 SWI5Q1ZZU3 235 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 CAPRIN2Q6IMN6 1127 aaKnown RBP9.88□□□□□ -0.83
SP140-204ENST00000417495 CCDC50Q8IVM0 306 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 SLF2Q8IX21 1173 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 USP33Q8TEY7 942 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 BRINP2Q9C0B6 783 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 ZBTB1Q9Y2K1 713 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 ATP6V0A2Q9Y487 856 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 ATP6V1DQ9Y5K8 247 aa9.88□□□□□ -0.83
SP140-204ENST00000417495 GOLGA6L9A6NEM1 432 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 BOLA2-SMG1P6H3BVE0 249 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 ZEB2O60315 1214 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 CAVIN2O95810 425 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 ZFXP17010 805 aaPredicted RBP9.87□□□□□ -0.83
SP140-204ENST00000417495 DESP17661 470 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 DAB2P98082 770 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 MYBPC3Q14896 1274 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 XAGE2Q96GT9 111 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 LUC7LQ9NQ29 371 aaKnown RBP9.87□□□□□ -0.83
SP140-204ENST00000417495 TCEAL9Q9UHQ7 104 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 A0A0D9SFI3 127 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 SCNN1BP51168 640 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 CUL4BQ13620 913 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 UBE3CQ15386 1083 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 PRPF38BQ5VTL8 546 aaKnown RBP9.87□□□□□ -0.83
SP140-204ENST00000417495 C1orf216Q8TAB5 229 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 MPP4Q96JB8 637 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 UIMC1Q96RL1 719 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 SRPK1Q96SB4 655 aaKnown RBP9.87□□□□□ -0.83
SP140-204ENST00000417495 RTEL1Q9NZ71 1219 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 SWAP70Q9UH65 585 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 ZDHHC9Q9Y397 364 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 LRRC37AA6NMS7 1700 aa9.87□□□□□ -0.83
SP140-204ENST00000417495 IRS4O14654 1257 aaPredicted RBP9.86□□□□□ -0.83
SP140-204ENST00000417495 SKAP2O75563 359 aaPredicted RBP9.86□□□□□ -0.83
SP140-204ENST00000417495 NTSR2O95665 410 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 CASTP20810 708 aaKnown RBP9.86□□□□□ -0.83
SP140-204ENST00000417495 PDCP20941 246 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 CRKLP46109 303 aaKnown RBP9.86□□□□□ -0.83
SP140-204ENST00000417495 PIP4K2BP78356 416 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 CUL3Q13618 768 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 RCN1Q15293 331 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 PHF12Q96QT6 1004 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 CAPS2Q9BXY5 557 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 SLC7A5P2Q9GIP4 190 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 RPAP3Q9H6T3 665 aaPredicted RBP9.86□□□□□ -0.83
SP140-204ENST00000417495 TRMT1Q9NXH9 659 aaKnown RBP9.86□□□□□ -0.83
SP140-204ENST00000417495 SEL1LQ9UBV2 794 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 NID2Q14112 1375 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 TMEM110-MUSTN1A8MSY1 372 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 MBD4O95243 580 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 TBC1D8O95759 1140 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 NEK2P51955 445 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 AK2P54819 239 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 CACNB1Q02641 598 aaPredicted RBP9.86□□□□□ -0.83
SP140-204ENST00000417495 FKBP4Q02790 459 aaKnown RBP eCLIP9.86□□□□□ -0.83
SP140-204ENST00000417495 CEP57L1Q8IYX8 460 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 CEP112Q8N8E3 955 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 GABPB2Q8TAK5 448 aaPredicted RBP9.86□□□□□ -0.83
SP140-204ENST00000417495 LPIN2Q92539 896 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 HOOK2Q96ED9 719 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 SENP7Q9BQF6 1050 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 BOLA2Q9H3K6 86 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 L2HGDHQ9H9P8 463 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 ZMAT5Q9UDW3 170 aaKnown RBP9.86□□□□□ -0.83
SP140-204ENST00000417495 UBN2Q6ZU65 1347 aa9.86□□□□□ -0.83
SP140-204ENST00000417495 LIN7AO14910 233 aaPredicted RBP9.85□□□□□ -0.83
SP140-204ENST00000417495 PDE8BO95263 885 aa9.85□□□□□ -0.83
SP140-204ENST00000417495 RPSAP08865 295 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms