RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 IFT20Q8IY31 132 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 MTMR14Q8NCE2 650 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 MIPOL1Q8TD10 442 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 ZNF516Q92618 1163 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 EAF2Q96CJ1 260 aaPredicted RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 NAF1Q96HR8 494 aaKnown RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 SLC6A16Q9GZN6 736 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 CCDC8Q9H0W5 538 aaPredicted RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 TAF1DQ9H5J8 278 aaPredicted RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 PRDM16Q9HAZ2 1276 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 PIDD1Q9HB75 910 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 TMBIM4Q9HC24 238 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 KCNMB3Q9NPA1 279 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 SNX12Q9UMY4 172 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 TFR2Q9UP52 801 aa7.06□□□□□ -1.28
CCNT1-202ENST00000417344 MAP2P11137 1827 aaKnown RBP7.06□□□□□ -1.28
CCNT1-202ENST00000417344 PTPRMP28827 1452 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 GCOM1H8Y6P7 765 aaPredicted RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 FAM153BP0C7A2 387 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 MYZAPP0CAP1 466 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 ATP2A2P16615 1042 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 SCNN1BP51168 640 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 MRPS35P82673 323 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 ZBED6P86452 979 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 PPARAQ07869 468 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 MAP3K12Q12852 859 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 EIF4A2Q14240 407 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 LBRQ14739 615 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 SEPT2Q15019 361 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 TAF11Q15544 211 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 IFI16Q16666 785 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 FAM153CQ494X1 144 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 C8orf74Q6P047 294 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 CCDC129Q6ZRS4 1044 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 TRIM42Q8IWZ5 723 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 NBPF15Q8N660 670 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 ANKS4BQ8N8V4 417 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 CNBD1Q8NA66 436 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 CCDC197Q8NCU1 140 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 PNMA1Q8ND90 353 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 RAPGEF5Q92565 580 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 CCDC97Q96F63 343 aaPredicted RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 RBM17Q96I25 401 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 MAP3K14Q99558 947 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 GDF3Q9NR23 364 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 GJB4Q9NTQ9 266 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 DNAAF2Q9NVR5 837 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 TLR7Q9NYK1 1049 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 FAM153AQ9UHL3 310 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 NFU1Q9UMS0 254 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 CEP131Q9UPN4 1083 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 PA2G4Q9UQ80 394 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 N4BP2Q86UW6 1770 aaPredicted RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 GOLGA6L10A0A0M3HER8 536 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 EIF4E1BA6NMX2 242 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 PHF20L1A8MW92 1017 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 BACH1O14867 736 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 CREB3O43889 395 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 ORC4O43929 436 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 RAD21O60216 631 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 NQO1P15559 274 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 PRLRP16471 622 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 DRD4P21917 467 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 TMOD1P28289 359 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 CCT6AP40227 531 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 CARSP49589 748 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 STX17P56962 302 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 SFSWAPQ12872 951 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 SGSM1Q2NKQ1 1148 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 ANO7Q6IWH7 933 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 DNAJC14Q6Y2X3 702 aaPredicted RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 ERICH1Q86X53 443 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 SPICE1Q8N0Z3 855 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 MKL1Q969V6 931 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 COG3Q96JB2 828 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 PHAXQ9H814 394 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 TMEM165Q9HC07 324 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 PCMTD2Q9NV79 361 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 PLAAQ9Y263 795 aa7.05□□□□□ -1.28
CCNT1-202ENST00000417344 FAM208AQ9UK61 1670 aaKnown RBP7.05□□□□□ -1.28
CCNT1-202ENST00000417344 ATP7AQ04656 1500 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 RFX7Q2KHR2 1363 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 A6NJR5 290 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 ALDH1B1P30837 517 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 GNAQP50148 359 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 GUCY2FP51841 1108 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 PPP2R2AP63151 447 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 PPARDQ03181 441 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 TEFQ10587 303 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 BIRC3Q13489 604 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 CUL4BQ13620 913 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 ITIH4Q14624 930 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 MYBPC3Q14896 1274 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 KIAA0753Q2KHM9 967 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 MCMDC2Q4G0Z9 681 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 BEND3Q5T5X7 828 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 TRIM68Q6AZZ1 485 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 KLHL10Q6JEL2 608 aa7.04□□□□□ -1.28
CCNT1-202ENST00000417344 LRIG3Q6UXM1 1119 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms