RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SGO2Q562F6 1265 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 ARMCX5Q6P1M9 558 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 POMGNT1Q8WZA1 660 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 FAM167BQ9BTA0 163 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 STK24Q9Y6E0 443 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 PPP2R5BQ15173 497 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 ZNF658Q5TYW1 1059 aaPredicted RBP13.11□□□□□ -0.31
UBR4-205ENST00000417040 DNAJC10Q8IXB1 793 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 LINC00301Q8NCQ3 95 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 PPWD1Q96BP3 646 aaKnown RBP13.11□□□□□ -0.31
UBR4-205ENST00000417040 HDAC11Q96DB2 347 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 ATP10BO94823 1461 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 ZBBXA8MT70 800 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 TOM1L1O75674 476 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 NDUFA10O95299 355 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 PLS3P13797 630 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 LONP1P36776 959 aaKnown RBP13.11□□□□□ -0.31
UBR4-205ENST00000417040 HADHQ16836 314 aaKnown RBP13.11□□□□□ -0.31
UBR4-205ENST00000417040 XKR9Q5GH70 373 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 P2RX5Q93086 422 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 GOLPH3LQ9H4A5 285 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 C1orf112Q9NSG2 853 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 ADAM21Q9UKJ8 722 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 PPME1Q9Y570 386 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 PCDHB6Q9Y5E3 794 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 ARHGEF12Q9NZN5 1544 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 IKBKBO14920 756 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 SLFNL1Q499Z3 407 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 DEPTORQ8TB45 409 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 FAM26FQ5R3K3 315 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 CADPS2Q86UW7 1296 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 SESTD1Q86VW0 696 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 MAML1Q92585 1016 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 MLXIPLQ9NP71 852 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 LARSQ9P2J5 1176 aaKnown RBP13.11□□□□□ -0.31
UBR4-205ENST00000417040 UHRF1BP1LA0JNW5 1464 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 MAGEA9P43362 315 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 PABPC4Q13310 644 aaKnown RBP eCLIP13.1□□□□□ -0.31
UBR4-205ENST00000417040 PROSER3Q2NL68 480 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 CCDC144BQ3MJ40 725 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 BEND6Q5SZJ8 279 aaPredicted RBP13.1□□□□□ -0.31
UBR4-205ENST00000417040 FBXO41Q8TF61 875 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 HAUS1Q96CS2 278 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 DYDC2Q96IM9 177 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 PICK1Q9NRD5 415 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 ARPP21Q9UBL0 812 aaPredicted RBP13.1□□□□□ -0.31
UBR4-205ENST00000417040 CTTNBP2Q8WZ74 1663 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 CFLARO15519 480 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 ACSL3O95573 720 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 NCF2P19878 526 aaPredicted RBP13.1□□□□□ -0.31
UBR4-205ENST00000417040 RESTQ13127 1097 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 NACA2Q9H009 215 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 USP40Q9NVE5 1235 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 KRT3P12035 628 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
UBR4-205ENST00000417040 CCDC117Q8IWD4 279 aaPredicted RBP13.1□□□□□ -0.31
UBR4-205ENST00000417040 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 NLRP7Q8WX94 980 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 SH2D4AQ9H788 454 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
UBR4-205ENST00000417040 ZNF608Q9ULD9 1512 aaPredicted RBP13.1□□□□□ -0.31
UBR4-205ENST00000417040 NR2F2P24468 414 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 MARCH10Q8NA82 808 aaPredicted RBP13.1□□□□□ -0.31
UBR4-205ENST00000417040 ZNF653Q96CK0 615 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 PAGE5Q96GU1 130 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 AZI2Q9H6S1 392 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 PCDHB4Q9Y5E5 795 aa13.1□□□□□ -0.31
UBR4-205ENST00000417040 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
UBR4-205ENST00000417040 MAPK4P31152 587 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 PHEXP78562 749 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 LRRC23Q53EV4 343 aaPredicted RBP13.09□□□□□ -0.31
UBR4-205ENST00000417040 POLR3EQ9NVU0 708 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 hCG_2014768A0A024R1R8 64 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 PGRMC1O00264 195 aaKnown RBP13.09□□□□□ -0.31
UBR4-205ENST00000417040 NUP153P49790 1475 aaKnown RBP13.09□□□□□ -0.31
UBR4-205ENST00000417040 PRAMEF22A3QJZ6 481 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 CCDC151A5D8V7 595 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 SCNN1DP51172 638 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 CC2D1AQ6P1N0 951 aaPredicted RBP13.09□□□□□ -0.31
UBR4-205ENST00000417040 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 NSMCE1Q8WV22 266 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 ATP8A2Q9NTI2 1148 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
UBR4-205ENST00000417040 POLA2Q14181 598 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 HP1BP3Q5SSJ5 553 aaPredicted RBP13.09□□□□□ -0.31
UBR4-205ENST00000417040 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 TADA2BQ86TJ2 420 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 PLEKHF1Q96S99 279 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 ZMYND12Q9H0C1 365 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 TEX14Q8IWB6 1497 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 MGEA5O60502 916 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 ECEL1O95672 775 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 ABL1P00519 1130 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 PDE1BQ01064 536 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 ASPHQ12797 758 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms