RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 FPGSQ05932 587 aa17.61■□□□□ 0.41
UBXN4-203ENST00000416538 PDE4DQ08499 809 aa17.61■□□□□ 0.41
UBXN4-203ENST00000416538 TROAPQ12815 778 aa17.61■□□□□ 0.41
UBXN4-203ENST00000416538 C16orf59Q7L2K0 433 aa17.61■□□□□ 0.41
UBXN4-203ENST00000416538 FBXO11Q86XK2 927 aa17.61■□□□□ 0.41
UBXN4-203ENST00000416538 RGS22Q8NE09 1264 aa17.61■□□□□ 0.41
UBXN4-203ENST00000416538 IFIT3O14879 490 aaKnown RBP17.6■□□□□ 0.41
UBXN4-203ENST00000416538 B4GALT4O60513 344 aa17.6■□□□□ 0.41
UBXN4-203ENST00000416538 PURAQ00577 322 aaKnown RBP17.6■□□□□ 0.41
UBXN4-203ENST00000416538 GHRHRQ02643 423 aa17.6■□□□□ 0.41
UBXN4-203ENST00000416538 ITGA7Q13683 1181 aa17.6■□□□□ 0.41
UBXN4-203ENST00000416538 PPP2R5BQ15173 497 aa17.6■□□□□ 0.41
UBXN4-203ENST00000416538 OR6J1Q8NGC5 347 aa17.6■□□□□ 0.41
UBXN4-203ENST00000416538 NCOA7Q8NI08 942 aa17.6■□□□□ 0.41
UBXN4-203ENST00000416538 ESYT1Q9BSJ8 1104 aa17.6■□□□□ 0.41
UBXN4-203ENST00000416538 MYO9BQ13459 2157 aa17.6■□□□□ 0.41
UBXN4-203ENST00000416538 CABYRO75952 493 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 CSF2RAP15509 400 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 CYP2C18P33260 490 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 TRDNQ13061 729 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 FAM109BQ6ICB4 259 aaPredicted RBP17.59■□□□□ 0.41
UBXN4-203ENST00000416538 MFSD5Q6N075 450 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 CCDC62Q6P9F0 684 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 RALYLQ86SE5 291 aaKnown RBP17.59■□□□□ 0.41
UBXN4-203ENST00000416538 IL31RAQ8NI17 732 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 IGDCC4Q8TDY8 1250 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 SCFD2Q8WU76 684 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 VWCEQ96DN2 955 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 RNPC3Q96LT9 517 aaKnown RBP17.59■□□□□ 0.41
UBXN4-203ENST00000416538 FAM161BQ96MY7 647 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 PIGSQ96S52 555 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■□□□□ 9.8
UBXN4-203ENST00000416538 TRPV6Q9H1D0 765 aa17.59■□□□□ 0.41
UBXN4-203ENST00000416538 EIF2AK2P19525 551 aaKnown RBP17.58■□□□□ 0.4
UBXN4-203ENST00000416538 HSD17B4P51659 736 aa17.58■□□□□ 0.4
UBXN4-203ENST00000416538 WTAPQ15007 396 aa17.58■□□□□ 0.4
UBXN4-203ENST00000416538 HOMER1Q86YM7 354 aa17.58■□□□□ 0.4
UBXN4-203ENST00000416538 MYL10Q9BUA6 226 aa17.58■□□□□ 0.4
UBXN4-203ENST00000416538 NOC4LQ9BVI4 516 aaKnown RBP17.58■□□□□ 0.4
UBXN4-203ENST00000416538 AMNQ9BXJ7 453 aa17.58■□□□□ 0.4
UBXN4-203ENST00000416538 WNT8AQ9H1J5 351 aa17.58■□□□□ 0.4
UBXN4-203ENST00000416538 TTYH1Q9H313 450 aaPredicted RBP17.58■□□□□ 0.4
UBXN4-203ENST00000416538 RIOX1Q9H6W3 641 aa17.58■□□□□ 0.4
UBXN4-203ENST00000416538 LY9Q9HBG7 655 aa17.58■□□□□ 0.4
UBXN4-203ENST00000416538 MRPL11Q9Y3B7 192 aaKnown RBP17.58■□□□□ 0.4
UBXN4-203ENST00000416538 RBAK-RBAKDNI3L0D1 243 aa17.57■□□□□ 0.4
UBXN4-203ENST00000416538 ZBTB5O15062 677 aa17.57■□□□□ 0.4
UBXN4-203ENST00000416538 CFBP00751 764 aa17.57■□□□□ 0.4
UBXN4-203ENST00000416538 MYL3P08590 195 aa17.57■□□□□ 0.4
UBXN4-203ENST00000416538 ACRP10323 421 aa17.57■□□□□ 0.4
UBXN4-203ENST00000416538 TMEM67Q5HYA8 995 aa17.57■□□□□ 0.4
UBXN4-203ENST00000416538 RMDN3Q96TC7 470 aa17.57■□□□□ 0.4
UBXN4-203ENST00000416538 PXMP2Q9NR77 195 aa17.57■□□□□ 0.4
UBXN4-203ENST00000416538 A6NJR5 290 aa17.56■□□□□ 0.4
UBXN4-203ENST00000416538 SLC27A2O14975 620 aa17.56■□□□□ 0.4
UBXN4-203ENST00000416538 TLR3O15455 904 aaKnown RBP17.56■□□□□ 0.4
UBXN4-203ENST00000416538 ZEB2O60315 1214 aa17.56■□□□□ 0.4
UBXN4-203ENST00000416538 RGS20O76081 388 aa17.56■□□□□ 0.4
UBXN4-203ENST00000416538 TXNP10599 105 aaKnown RBP17.56■□□□□ 0.4
UBXN4-203ENST00000416538 HOXA13P31271 388 aaPredicted RBP17.56■□□□□ 0.4
UBXN4-203ENST00000416538 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
UBXN4-203ENST00000416538 ARHGAP1Q07960 439 aa17.56■□□□□ 0.4
UBXN4-203ENST00000416538 TMEM240Q5SV17 173 aa17.56■□□□□ 0.4
UBXN4-203ENST00000416538 RASIP1Q5U651 963 aa17.56■□□□□ 0.4
UBXN4-203ENST00000416538 SEPT14Q6ZU15 432 aa17.56■□□□□ 0.4
UBXN4-203ENST00000416538 NSUN6Q8TEA1 469 aaKnown RBP17.56■□□□□ 0.4
UBXN4-203ENST00000416538 ALDH8A1Q9H2A2 487 aaPredicted RBP17.56■□□□□ 0.4
UBXN4-203ENST00000416538 TRMT13Q9NUP7 481 aaKnown RBP17.56■□□□□ 0.4
UBXN4-203ENST00000416538 STXBP5LQ9Y2K9 1186 aa17.56■□□□□ 0.4
UBXN4-203ENST00000416538 NKRFO15226 690 aaKnown RBP eCLIP17.55■□□□□ 0.4
UBXN4-203ENST00000416538 CPT1AP50416 773 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 TTLL4Q14679 1199 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 LY6KQ17RY6 165 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 BMP2KLQ5H9B9 411 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 MCF2L2Q86YR7 1114 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 ZNF654Q8IZM8 581 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 PDCD2LQ9BRP1 358 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 MAF1Q9H063 256 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 HIPK3Q9H422 1215 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 PCDHA1Q9Y5I3 950 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 EYSQ5T1H1 3165 aa17.55■□□□□ 0.4
UBXN4-203ENST00000416538 ERICH2A1L162 156 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 SH2B2O14492 632 aaPredicted RBP17.54■□□□□ 0.4
UBXN4-203ENST00000416538 PRC1O43663 620 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 NR3C2P08235 984 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 MMP3P08254 477 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 CYP2C9P11712 490 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 PPIGQ13427 754 aaKnown RBP eCLIP17.54■□□□□ 0.41e-13■□□□□ 10.1
UBXN4-203ENST00000416538 NECTIN1Q15223 517 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 ZNF697Q5TEC3 545 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 CREB3L3Q68CJ9 461 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
UBXN4-203ENST00000416538 RAB11FIP4Q86YS3 637 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 AFG1LQ8WV93 481 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 PIBF1Q8WXW3 757 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 ZFP91Q96JP5 570 aaPredicted RBP17.54■□□□□ 0.4
UBXN4-203ENST00000416538 CTAGE1Q96RT6 745 aa17.54■□□□□ 0.4
UBXN4-203ENST00000416538 MPHOSPH6Q99547 160 aaKnown RBP17.54■□□□□ 0.4
UBXN4-203ENST00000416538 MTG1Q9BT17 334 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms