RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ZNF713Q8N859 430 aaPredicted RBP20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 LENG1Q96BZ8 264 aaPredicted RBP20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 ALDH8A1Q9H2A2 487 aaPredicted RBP20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 SPC25Q9HBM1 224 aa20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 PXMP2Q9NR77 195 aa20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 PCDH10Q9P2E7 1040 aa20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 GTF3C3Q9Y5Q9 886 aa20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 V9GY48 417 aaPredicted RBP20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 MCM3APO60318 1980 aa20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 PGK1P00558 417 aa20.75■□□□□ 0.91
SEMA3B-201ENST00000416295 MYCNP04198 464 aaPredicted RBP20.75■□□□□ 0.91
SEMA3B-201ENST00000416295 COL6A1P12109 1028 aa20.75■□□□□ 0.91
SEMA3B-201ENST00000416295 ADCYAP1R1P41586 468 aa20.75■□□□□ 0.91
SEMA3B-201ENST00000416295 LRRC41Q15345 812 aa20.75■□□□□ 0.91
SEMA3B-201ENST00000416295 GJC2Q5T442 439 aaPredicted RBP20.75■□□□□ 0.91
SEMA3B-201ENST00000416295 TAPT1Q6NXT6 567 aa20.75■□□□□ 0.91
SEMA3B-201ENST00000416295 COLQQ9Y215 455 aaPredicted RBP20.75■□□□□ 0.91
SEMA3B-201ENST00000416295 SYNRGQ9UMZ2 1314 aa20.75■□□□□ 0.91
SEMA3B-201ENST00000416295 PIK3CDO00329 1044 aa20.74■□□□□ 0.91
SEMA3B-201ENST00000416295 EVI5O60447 810 aa20.74■□□□□ 0.91
SEMA3B-201ENST00000416295 EIF2AK2P19525 551 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-201ENST00000416295 STXBP2Q15833 593 aa20.74■□□□□ 0.91
SEMA3B-201ENST00000416295 PPP1R18Q6NYC8 613 aa20.74■□□□□ 0.91
SEMA3B-201ENST00000416295 NOL8Q76FK4 1167 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-201ENST00000416295 TEX2Q8IWB9 1127 aa20.74■□□□□ 0.91
SEMA3B-201ENST00000416295 SMARCC2Q8TAQ2 1214 aa20.74■□□□□ 0.91
SEMA3B-201ENST00000416295 PSTPIP2Q9H939 334 aa20.74■□□□□ 0.91
SEMA3B-201ENST00000416295 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 RBM47A0AV96 593 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 ADCY6O43306 1168 aa20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 ADAMTS4O75173 837 aa20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 CCT2P78371 535 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 AKAP17AQ02040 695 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 WWC2Q6AWC2 1192 aa20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 FCHSD1Q86WN1 690 aa20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 SCFD2Q8WU76 684 aa20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 GPKOWQ92917 476 aaPredicted RBP eCLIP20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 UPF3AQ9H1J1 476 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 PDGFCQ9NRA1 345 aa20.73■□□□□ 0.91
SEMA3B-201ENST00000416295 NR3C2P08235 984 aa20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 IFNAR1P17181 557 aa20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 SMPD1P17405 629 aa20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 NAPAP54920 295 aa20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 GJA9P57773 515 aa20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 CPLX2Q6PUV4 134 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 PDCD2LQ9BRP1 358 aa20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 TSEN34Q9BSV6 310 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 RNF26Q9BY78 433 aaPredicted RBP20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 WDR11Q9BZH6 1224 aa20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 UPF2Q9HAU5 1272 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 NCOA5Q9HCD5 579 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 BARHL2Q9NY43 387 aa20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 GNEQ9Y223 722 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 Q9Y3F1 56 aa20.72■□□□□ 0.91
SEMA3B-201ENST00000416295 MEIS2O14770 477 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 CPLX1O14810 134 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 PRPF3O43395 683 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 EIF3JO75822 258 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 C6orf222P0C671 652 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 SCG2P13521 617 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 CST5P28325 142 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 NEK4P51957 841 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 PGM5Q15124 567 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 NTRK3Q16288 839 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 PFKFB3Q16875 520 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 DUSP28Q4G0W2 176 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 USP17L6PQ6QN14 398 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 CHRDL2Q6WN34 429 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 TLK2Q86UE8 772 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 KLHDC9Q8NEP7 349 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 LARP6Q9BRS8 491 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 SENP6Q9GZR1 1112 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 AP5M1Q9H0R1 490 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 PHF24Q9UPV7 400 aa20.71■□□□□ 0.91
SEMA3B-201ENST00000416295 STXBP3O00186 592 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 NKRFO15226 690 aaKnown RBP eCLIP20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 CCND2P30279 289 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 AK2P54819 239 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 NKX3-2P78367 333 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 TTLL4Q14679 1199 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 TRIM22Q8IYM9 498 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 PCSK9Q8NBP7 692 aaKnown RBP20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 CCDC12Q8WUD4 166 aaPredicted RBP20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 PHKBQ93100 1093 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 C22orf23Q9BZE7 217 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 GLT8D2Q9H1C3 349 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 FRMPD4Q14CM0 1322 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 TRIOBPQ9H2D6 2365 aa20.7■□□□□ 0.9
SEMA3B-201ENST00000416295 MOXD2PA6NHM9 499 aa20.69■□□□□ 0.9
SEMA3B-201ENST00000416295 MYCLP12524 364 aaPredicted RBP20.69■□□□□ 0.9
SEMA3B-201ENST00000416295 STK3Q13188 491 aa20.69■□□□□ 0.9
SEMA3B-201ENST00000416295 SEPT14Q6ZU15 432 aa20.69■□□□□ 0.9
SEMA3B-201ENST00000416295 VSIG10LQ86VR7 867 aa20.69■□□□□ 0.9
SEMA3B-201ENST00000416295 SLC26A6Q9BXS9 759 aa20.69■□□□□ 0.9
SEMA3B-201ENST00000416295 SLKQ9H2G2 1235 aaPredicted RBP20.69■□□□□ 0.9
SEMA3B-201ENST00000416295 RIC8AQ9NPQ8 531 aa20.69■□□□□ 0.9
SEMA3B-201ENST00000416295 TPCN1Q9ULQ1 816 aa20.69■□□□□ 0.9
SEMA3B-201ENST00000416295 MYADML2A6NDP7 307 aa20.68■□□□□ 0.9
SEMA3B-201ENST00000416295 SPDYE3A6NKU9 549 aa20.68■□□□□ 0.9
SEMA3B-201ENST00000416295 DYNC1LI2O43237 492 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms