RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 SESTD1Q86VW0 696 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 MYL3P08590 195 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 CYP21A2P08686 494 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 ARHGAP44Q17R89 818 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 SFMBT2Q5VUG0 894 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 SNRNP48Q6IEG0 339 aaKnown RBP17.17■□□□□ 0.34
PHRF1-203ENST00000416188 DAAM2Q86T65 1068 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
PHRF1-203ENST00000416188 ASIC3Q9UHC3 531 aa17.16■□□□□ 0.34
PHRF1-203ENST00000416188 SNX16P57768 344 aa17.16■□□□□ 0.34
PHRF1-203ENST00000416188 DCUN1D2Q6PH85 259 aa17.16■□□□□ 0.34
PHRF1-203ENST00000416188 IFT20Q8IY31 132 aa17.16■□□□□ 0.34
PHRF1-203ENST00000416188 NTSR2O95665 410 aa17.16■□□□□ 0.34
PHRF1-203ENST00000416188 APOA5Q6Q788 366 aa17.16■□□□□ 0.34
PHRF1-203ENST00000416188 LARSQ9P2J5 1176 aaKnown RBP17.16■□□□□ 0.34
PHRF1-203ENST00000416188 P4HA1P13674 534 aa17.16■□□□□ 0.34
PHRF1-203ENST00000416188 CFAP157Q5JU67 520 aa17.16■□□□□ 0.34
PHRF1-203ENST00000416188 AFAP1L1Q8TED9 768 aa17.16■□□□□ 0.34
PHRF1-203ENST00000416188 RAVER2Q9HCJ3 691 aaKnown RBP17.16■□□□□ 0.34
PHRF1-203ENST00000416188 RABGAP1Q9Y3P9 1069 aa17.16■□□□□ 0.34
PHRF1-203ENST00000416188 ZSCAN20P17040 1043 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-203ENST00000416188 ZBED2Q9BTP6 218 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 RPS12P25398 132 aaKnown RBP17.15■□□□□ 0.34
PHRF1-203ENST00000416188 DMP1Q13316 513 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-203ENST00000416188 MAP7D1Q3KQU3 841 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 RPAP1Q9BWH6 1393 aaPredicted RBP17.15■□□□□ 0.34
PHRF1-203ENST00000416188 FOXO4P98177 505 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 LRMPQ12912 555 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 GAS2L3Q86XJ1 694 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 RASEFQ8IZ41 740 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 PGBD1Q96JS3 809 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 IFIH1Q9BYX4 1025 aaKnown RBP17.15■□□□□ 0.34
PHRF1-203ENST00000416188 HERC5Q9UII4 1024 aaKnown RBP17.15■□□□□ 0.34
PHRF1-203ENST00000416188 UTYO14607 1347 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 K7ENM7 598 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 BCRP11274 1271 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 RPS6KA1Q15418 735 aa17.15■□□□□ 0.34
PHRF1-203ENST00000416188 PRAMEF18Q5VWM3 479 aa17.14■□□□□ 0.34
PHRF1-203ENST00000416188 PEX26Q7Z412 305 aa17.14■□□□□ 0.34
PHRF1-203ENST00000416188 DCAF4Q8WV16 495 aa17.14■□□□□ 0.34
PHRF1-203ENST00000416188 FEM1BQ9UK73 627 aa17.14■□□□□ 0.34
PHRF1-203ENST00000416188 hCG_1984214I3L0E3 225 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 PDIA3P30101 505 aaKnown RBP17.14■□□□□ 0.33
PHRF1-203ENST00000416188 HMGCS2P54868 508 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 RNASELQ05823 741 aaKnown RBP17.14■□□□□ 0.33
PHRF1-203ENST00000416188 ADCK5Q3MIX3 580 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 SAMD7Q7Z3H4 446 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 ZNF713Q8N859 430 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-203ENST00000416188 CLIC6Q96NY7 704 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 RABEP2Q9H5N1 569 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 NUB1Q9Y5A7 615 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 NDUFAB1O14561 156 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 ALDH3A1P30838 453 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 C10orf67Q8IYJ2 551 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 ZSWIM5Q9P217 1185 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 MYO1AQ9UBC5 1043 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 ZNF521Q96K83 1311 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 INO80B-WBP1J3KQ70 363 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 INO80BQ9C086 356 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-203ENST00000416188 PCDHA7Q9UN72 937 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 HOXA13P31271 388 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-203ENST00000416188 SLC44A5Q8NCS7 719 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 RNF26Q9BY78 433 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-203ENST00000416188 WDR11Q9BZH6 1224 aa17.14■□□□□ 0.33
PHRF1-203ENST00000416188 DAPK3O43293 454 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 FAM178BQ8IXR5 827 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 RASGRP4Q8TDF6 673 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 PLEKHA4Q9H4M7 779 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 GOLGA6CA6NDK9 693 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 GOLGA6DP0CG33 693 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 CMA1P23946 247 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 CLUL1Q15846 466 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 INTS8Q75QN2 995 aaKnown RBP17.13■□□□□ 0.33
PHRF1-203ENST00000416188 LSG1Q9H089 658 aaKnown RBP17.13■□□□□ 0.33
PHRF1-203ENST00000416188 GOLGA6AQ9NYA3 693 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 KCNH4Q9UQ05 1017 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 ATF7P17544 494 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-203ENST00000416188 ATP5DP30049 168 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 DGKHQ86XP1 1220 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 OR8K1Q8NGG5 319 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 DESI2Q9BSY9 194 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 PLA2G12BQ9BX93 195 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 FTOQ9C0B1 505 aaKnown RBP eCLIP17.13■□□□□ 0.33
PHRF1-203ENST00000416188 ZFYVE28Q9HCC9 887 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 MYOZ2Q9NPC6 264 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 DCP1AQ9NPI6 582 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-203ENST00000416188 KCNJ18B7U540 433 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 SNAPC2Q13487 334 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 KCNJ12Q14500 433 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 PPP2R5AQ15172 486 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 CFAP221Q4G0U5 840 aa17.13■□□□□ 0.33
PHRF1-203ENST00000416188 INTS5Q6P9B9 1019 aaKnown RBP17.13■□□□□ 0.33
PHRF1-203ENST00000416188 TNNC2P02585 160 aa17.12■□□□□ 0.33
PHRF1-203ENST00000416188 FCER1AP12319 257 aa17.12■□□□□ 0.33
PHRF1-203ENST00000416188 CYP2J2P51589 502 aa17.12■□□□□ 0.33
PHRF1-203ENST00000416188 MYOCDQ8IZQ8 938 aa17.12■□□□□ 0.33
PHRF1-203ENST00000416188 PCDHA4Q9UN74 947 aa17.12■□□□□ 0.33
PHRF1-203ENST00000416188 SND1Q7KZF4 910 aaKnown RBP eCLIP17.12■□□□□ 0.33
PHRF1-203ENST00000416188 CCDC105Q8IYK2 499 aa17.12■□□□□ 0.33
PHRF1-203ENST00000416188 GDAP1L1Q96MZ0 367 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms