RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 INTS3Q68E01 1043 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 WWC2Q6AWC2 1192 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 ZNF585AQ6P3V2 769 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 ARHGEF18Q6ZSZ5 1173 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 ERMP1Q7Z2K6 904 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 SLC9A7Q96T83 725 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 GORASP1Q9BQQ3 440 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 L2HGDHQ9H9P8 463 aa5.44□□□□□ -1.54
TRAPPC13-203ENST00000415825 DDX3XO00571 662 aaKnown RBP eCLIP5.43□□□□□ -1.54
TRAPPC13-203ENST00000415825 NPHS1O60500 1241 aa5.43□□□□□ -1.54
TRAPPC13-203ENST00000415825 IFNGR1P15260 489 aa5.43□□□□□ -1.54
TRAPPC13-203ENST00000415825 TDRD10Q5VZ19 366 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-203ENST00000415825 RCSD1Q6JBY9 416 aa5.43□□□□□ -1.54
TRAPPC13-203ENST00000415825 NKD1Q969G9 470 aa5.43□□□□□ -1.54
TRAPPC13-203ENST00000415825 C11orf21Q9P2W6 132 aa5.43□□□□□ -1.54
TRAPPC13-203ENST00000415825 DIS3Q9Y2L1 958 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-203ENST00000415825 TP53P04637 393 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 CD247P20963 164 aa5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 FHL2Q14192 279 aa5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 PPP2R5DQ14738 602 aa5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 ICAM4Q14773 271 aa5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 C9orf131Q5VYM1 1079 aa5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 DCAF15Q66K64 600 aa5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 HS2ST1Q7LGA3 356 aa5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 TMEM168Q9H0V1 697 aa5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 WDR33Q9C0J8 1336 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-203ENST00000415825 A0A087WZG4 1122 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 C9IYK1 514 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 PPFIA2O75334 1257 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 C8BP07358 591 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 PAMP19021 973 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 ERCC3P19447 782 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 TRAIPQ9BWF2 469 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 GBP3Q9H0R5 595 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 UBP1Q9NZI7 540 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 GULP1Q9UBP9 304 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 GGT7Q9UJ14 662 aa5.41□□□□□ -1.54
TRAPPC13-203ENST00000415825 NPHP3-ACAD11A0A0J9YXS1 232 aa5.4□□□□□ -1.54
TRAPPC13-203ENST00000415825 CRKP46108 304 aa5.4□□□□□ -1.54
TRAPPC13-203ENST00000415825 PURAQ00577 322 aaKnown RBP5.4□□□□□ -1.54
TRAPPC13-203ENST00000415825 SMN1Q16637 294 aaKnown RBP5.4□□□□□ -1.54
TRAPPC13-203ENST00000415825 FERD3LQ96RJ6 166 aa5.4□□□□□ -1.54
TRAPPC13-203ENST00000415825 SSBP3Q9BWW4 388 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC13-203ENST00000415825 COPRSQ9NQ92 184 aa5.4□□□□□ -1.54
TRAPPC13-203ENST00000415825 FAM86C1Q9NVL1 165 aa5.4□□□□□ -1.54
TRAPPC13-203ENST00000415825 PPP4R1LQ9P1A2 415 aa5.4□□□□□ -1.54
TRAPPC13-203ENST00000415825 SHOXO15266 292 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 FUCA1P04066 466 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 NTRK1P04629 796 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 INHBEP58166 350 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 PPP2CBP62714 309 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 PPP2CAP67775 309 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 NKX3-2P78367 333 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 KLF10Q13118 480 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 FBXO33Q7Z6M2 555 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 ADAT2Q7Z6V5 191 aaKnown RBP5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 IGDCC4Q8TDY8 1250 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 CLIC6Q96NY7 704 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 TM9SF2Q99805 663 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 FTSJ1Q9UET6 329 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 BACE2Q9Y5Z0 518 aa5.39□□□□□ -1.55
TRAPPC13-203ENST00000415825 STXBP3O00186 592 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 AMPD2Q01433 879 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 ABHD18Q0P651 414 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 CDSNQ15517 529 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 AXDND1Q5T1B0 1012 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 FBXW10Q5XX13 1052 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 SLFN13Q68D06 897 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 CPNE8Q86YQ8 564 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 SLITRK4Q8IW52 837 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 TAB3Q8N5C8 712 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 WRNIP1Q96S55 665 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 NT5C1AQ9BXI3 368 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 BARX1Q9HBU1 254 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 WHRNQ9P202 907 aa5.38□□□□□ -1.55
TRAPPC13-203ENST00000415825 C2orf71A6NGG8 1288 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 AURKAO14965 403 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 B4GALT3O60512 393 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 ZNF623O75123 536 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 PPM1BO75688 479 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 ITGA1P56199 1179 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 STK32CQ86UX6 486 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 SEC14L1Q92503 715 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 CSRNP2Q9H175 543 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 ZNF451Q9Y4E5 1061 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 TESMINQ9Y4I5 508 aa5.37□□□□□ -1.55
TRAPPC13-203ENST00000415825 DPY19L1Q2PZI1 675 aa5.36□□□□□ -1.55
TRAPPC13-203ENST00000415825 SPDYAQ5MJ70 313 aa5.36□□□□□ -1.55
TRAPPC13-203ENST00000415825 HEATR6Q6AI08 1181 aaKnown RBP5.36□□□□□ -1.55
TRAPPC13-203ENST00000415825 KBTBD2Q8IY47 623 aa5.36□□□□□ -1.55
TRAPPC13-203ENST00000415825 ADCY4Q8NFM4 1077 aa5.36□□□□□ -1.55
TRAPPC13-203ENST00000415825 MTA3Q9BTC8 594 aa5.36□□□□□ -1.55
TRAPPC13-203ENST00000415825 CD248Q9HCU0 757 aa5.36□□□□□ -1.55
TRAPPC13-203ENST00000415825 ADAMTS1Q9UHI8 967 aa5.36□□□□□ -1.55
TRAPPC13-203ENST00000415825 ING1Q9UK53 422 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC13-203ENST00000415825 EPHB4P54760 987 aa5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 PRKD1Q15139 912 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 DNAJC14Q6Y2X3 702 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 MILR1Q7Z6M3 343 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms