RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 NEFLP07196 543 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 RXRAP19793 462 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 ITGB8P26012 769 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 SMARCA1P28370 1054 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 TLE2Q04725 743 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 DUSP28Q4G0W2 176 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 GNASQ5JWF2 1037 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 CCDC62Q6P9F0 684 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 ANKRD33Q7Z3H0 272 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 HOMER1Q86YM7 354 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 TRIM43Q96BQ3 446 aaPredicted RBP12.69□□□□□ -0.38
A1CF-208ENST00000414883 TCEANC2Q96MN5 208 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 WDR11Q9BZH6 1224 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 PCDHA1Q9Y5I3 950 aa12.69□□□□□ -0.38
A1CF-208ENST00000414883 ELP1O95163 1332 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 A0A1W2PPC1 479 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 DYNC1LI2O43237 492 aaPredicted RBP12.68□□□□□ -0.38
A1CF-208ENST00000414883 HSPA4P34932 840 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 FUT2Q10981 343 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 FSCN1Q16658 493 aaKnown RBP12.68□□□□□ -0.38
A1CF-208ENST00000414883 RNF20Q5VTR2 975 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
A1CF-208ENST00000414883 MCF2L2Q86YR7 1114 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 RAB11FIP4Q86YS3 637 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 TMTC2Q8N394 836 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 SLC43A3Q8NBI5 491 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 NUP133Q8WUM0 1156 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 RMDN3Q96TC7 470 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 PXMP2Q9NR77 195 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 SNX14Q9Y5W7 946 aa12.68□□□□□ -0.38
A1CF-208ENST00000414883 RGS20O76081 388 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 CFBP00751 764 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 CPA1P15085 419 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 HOXA13P31271 388 aaPredicted RBP12.67□□□□□ -0.38
A1CF-208ENST00000414883 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
A1CF-208ENST00000414883 PDE4DQ08499 809 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 FAAP100Q0VG06 881 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 APOA5Q6Q788 366 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 CXCL17Q6UXB2 119 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 CMTR1Q8N1G2 835 aaKnown RBP12.67□□□□□ -0.38
A1CF-208ENST00000414883 PCSK9Q8NBP7 692 aaKnown RBP12.67□□□□□ -0.38
A1CF-208ENST00000414883 IL31RAQ8NI17 732 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 NSUN6Q8TEA1 469 aaKnown RBP12.67□□□□□ -0.38
A1CF-208ENST00000414883 COPS5Q92905 334 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 TOX2Q96NM4 488 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 IWS1Q96ST2 819 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 STARD7Q9NQZ5 370 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 FAM217BQ9NTX9 383 aaPredicted RBP12.67□□□□□ -0.38
A1CF-208ENST00000414883 UNC80Q8N2C7 3258 aa12.67□□□□□ -0.38
A1CF-208ENST00000414883 FRMPD4Q14CM0 1322 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 DOCK5Q9H7D0 1870 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 CCDC69A6NI79 296 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
A1CF-208ENST00000414883 KIAA0355O15063 1070 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 EIF2AK2P19525 551 aaKnown RBP12.66□□□□□ -0.38
A1CF-208ENST00000414883 KIF5BP33176 963 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 NFXL1Q6ZNB6 911 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 TMTC3Q6ZXV5 915 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 NOL8Q76FK4 1167 aaKnown RBP12.66□□□□□ -0.38
A1CF-208ENST00000414883 SAMD3Q8N6K7 520 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 FANCBQ8NB91 859 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
A1CF-208ENST00000414883 SCFD2Q8WU76 684 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 PIBF1Q8WXW3 757 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 LZTS2Q9BRK4 669 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 PDCD2LQ9BRP1 358 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 SPC25Q9HBM1 224 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 MAP3K20Q9NYL2 800 aaKnown RBP12.66□□□□□ -0.38
A1CF-208ENST00000414883 TBX21Q9UL17 535 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 SLC12A7Q9Y666 1083 aa12.66□□□□□ -0.38
A1CF-208ENST00000414883 ARVCFO00192 962 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 PQBP1O60828 265 aaKnown RBP12.65□□□□□ -0.38
A1CF-208ENST00000414883 CD4P01730 458 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 NR3C2P08235 984 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 CLTBP09497 229 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 CALM1P0DP23 149 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 CALM2P0DP24 149 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 CALM3P0DP25 149 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 GNAQP50148 359 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 ARHGAP1Q07960 439 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 KRT32Q14532 448 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 VSIG10LQ86VR7 867 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 FAM126BQ8IXS8 530 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 FBXL16Q8N461 479 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
A1CF-208ENST00000414883 GLT1D1Q96MS3 346 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 AGXT2Q9BYV1 514 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 AP5M1Q9H0R1 490 aa12.65□□□□□ -0.38
A1CF-208ENST00000414883 TRANK1O15050 2925 aa12.65□□□□□ -0.39
A1CF-208ENST00000414883 CNTNAP5Q8WYK1 1306 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 REV3LO60673 3130 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
A1CF-208ENST00000414883 hCG_1642624A0A1W2PR95 340 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 A6NJR5 290 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 MEIS2O14770 477 aa12.64□□□□□ -0.39
A1CF-208ENST00000414883 NKRFO15226 690 aaKnown RBP eCLIP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms