RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 TAP1Q03518 808 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 GPNMBQ14956 572 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 CCDC62Q6P9F0 684 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 RGS22Q8NE09 1264 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 PPP1R13LQ8WUF5 828 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 FAM227BQ96M60 508 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 TTC14Q96N46 770 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 TSPYL2Q9H2G4 693 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-210ENST00000413578 HSPD1P10809 573 aaKnown RBP14.31□□□□□ -0.12
LIMS2-210ENST00000413578 ACTN1P12814 892 aa14.31□□□□□ -0.12
LIMS2-210ENST00000413578 PDE4DQ08499 809 aa14.31□□□□□ -0.12
LIMS2-210ENST00000413578 BRDTQ58F21 947 aaPredicted RBP14.31□□□□□ -0.12
LIMS2-210ENST00000413578 ZNF589Q86UQ0 364 aaPredicted RBP14.31□□□□□ -0.12
LIMS2-210ENST00000413578 TICAM2Q86XR7 235 aa14.31□□□□□ -0.12
LIMS2-210ENST00000413578 HERC6Q8IVU3 1022 aa14.31□□□□□ -0.12
LIMS2-210ENST00000413578 MICALL1Q8N3F8 863 aa14.31□□□□□ -0.12
LIMS2-210ENST00000413578 MAF1Q9H063 256 aa14.31□□□□□ -0.12
LIMS2-210ENST00000413578 GPHNQ9NQX3 736 aaPredicted RBP14.31□□□□□ -0.12
LIMS2-210ENST00000413578 RAD50Q92878 1312 aa14.31□□□□□ -0.12
LIMS2-210ENST00000413578 LPXNO60711 386 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 BAIAP3O94812 1187 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 TXNP10599 105 aaKnown RBP14.3□□□□□ -0.12
LIMS2-210ENST00000413578 KCNQ1P51787 676 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 PDE1AP54750 535 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 RBL2Q08999 1139 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 AAK1Q2M2I8 961 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 MCMDC2Q4G0Z9 681 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 FAM47CQ5HY64 1035 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 RRP12Q5JTH9 1297 aaKnown RBP14.3□□□□□ -0.12
LIMS2-210ENST00000413578 KRT40Q6A162 431 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 SPRED2Q7Z698 418 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 SESTD1Q86VW0 696 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 TBC1D10CQ8IV04 446 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 TOMM22Q9NS69 142 aa14.3□□□□□ -0.12
LIMS2-210ENST00000413578 PCP11498 1178 aaKnown RBP14.29□□□□□ -0.12
LIMS2-210ENST00000413578 BFSP2Q13515 415 aa14.29□□□□□ -0.12
LIMS2-210ENST00000413578 RETREG2Q8NC44 543 aa14.29□□□□□ -0.12
LIMS2-210ENST00000413578 IL27Q8NEV9 243 aa14.29□□□□□ -0.12
LIMS2-210ENST00000413578 CAGE1Q8TC20 777 aa14.29□□□□□ -0.12
LIMS2-210ENST00000413578 DHX38Q92620 1227 aaKnown RBP14.29□□□□□ -0.12
LIMS2-210ENST00000413578 KAT2BQ92831 832 aa14.29□□□□□ -0.12
LIMS2-210ENST00000413578 MPHOSPH6Q99547 160 aaKnown RBP14.29□□□□□ -0.12
LIMS2-210ENST00000413578 CERS4Q9HA82 394 aa14.29□□□□□ -0.12
LIMS2-210ENST00000413578 COG5Q9UP83 839 aa14.29□□□□□ -0.12
LIMS2-210ENST00000413578 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
LIMS2-210ENST00000413578 CXCL10P02778 98 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 MMP3P08254 477 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 HAND2P61296 217 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 ARHGAP1Q07960 439 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 GRB10Q13322 594 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 SCN5AQ14524 2016 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 GPATCH4Q5T3I0 446 aaKnown RBP14.28□□□□□ -0.12
LIMS2-210ENST00000413578 SYTL5Q8TDW5 730 aaPredicted RBP14.28□□□□□ -0.12
LIMS2-210ENST00000413578 AFAP1L1Q8TED9 768 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 TBC1D5Q92609 795 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 C1QTNF1Q9BXJ1 281 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 TANC1Q9C0D5 1861 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 COL20A1Q9P218 1284 aa14.28□□□□□ -0.12
LIMS2-210ENST00000413578 NEDD4P46934 1319 aa14.27□□□□□ -0.12
LIMS2-210ENST00000413578 CCDC171Q6TFL3 1326 aa14.27□□□□□ -0.12
LIMS2-210ENST00000413578 TLL1O43897 1013 aa14.27□□□□□ -0.13
LIMS2-210ENST00000413578 PLA2G5P39877 138 aa14.27□□□□□ -0.13
LIMS2-210ENST00000413578 WDR5P61964 334 aaKnown RBP14.27□□□□□ -0.13
LIMS2-210ENST00000413578 NMIQ13287 307 aaPredicted RBP14.27□□□□□ -0.13
LIMS2-210ENST00000413578 PTGISQ16647 500 aa14.27□□□□□ -0.13
LIMS2-210ENST00000413578 ANKRD45Q5TZF3 282 aa14.27□□□□□ -0.13
LIMS2-210ENST00000413578 GDF6Q6KF10 455 aaPredicted RBP14.27□□□□□ -0.13
LIMS2-210ENST00000413578 DGKHQ86XP1 1220 aa14.27□□□□□ -0.13
LIMS2-210ENST00000413578 AFG1LQ8WV93 481 aa14.27□□□□□ -0.13
LIMS2-210ENST00000413578 ARNTL2Q8WYA1 636 aa14.27□□□□□ -0.13
LIMS2-210ENST00000413578 FTOQ9C0B1 505 aaKnown RBP eCLIP14.27□□□□□ -0.13
LIMS2-210ENST00000413578 CPVLQ9H3G5 476 aa14.27□□□□□ -0.13
LIMS2-210ENST00000413578 TET1Q8NFU7 2136 aa14.27□□□□□ -0.13
LIMS2-210ENST00000413578 LCHNA4D1U4 455 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 B4DLN1 442 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 KIF28PB7ZC32 967 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 GOLGA8HP0CJ92 632 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 SELPP16109 830 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 MRPL12P52815 198 aaKnown RBP14.26□□□□□ -0.13
LIMS2-210ENST00000413578 SKIV2LQ15477 1246 aaKnown RBP14.26□□□□□ -0.13
LIMS2-210ENST00000413578 LY6KQ17RY6 165 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 TCTN1Q2MV58 587 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 USH1GQ495M9 461 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 TRAF7Q6Q0C0 670 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 MFSD6Q6ZSS7 791 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 ANKS1AQ92625 1134 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 EMID1Q96A84 441 aaPredicted RBP14.26□□□□□ -0.13
LIMS2-210ENST00000413578 TAAR1Q96RJ0 339 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 UBA5Q9GZZ9 404 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 NOD1Q9Y239 953 aa14.26□□□□□ -0.13
LIMS2-210ENST00000413578 ABCB11O95342 1321 aa14.25□□□□□ -0.13
LIMS2-210ENST00000413578 HAS3O00219 553 aa14.25□□□□□ -0.13
LIMS2-210ENST00000413578 NBNO60934 754 aa14.25□□□□□ -0.13
LIMS2-210ENST00000413578 GH1P01241 217 aa14.25□□□□□ -0.13
LIMS2-210ENST00000413578 NT5C2P49902 561 aa14.25□□□□□ -0.13
LIMS2-210ENST00000413578 DEFB103AP81534 67 aa14.25□□□□□ -0.13
LIMS2-210ENST00000413578 HDAC1Q13547 482 aaPredicted RBP14.25□□□□□ -0.13
LIMS2-210ENST00000413578 CDC37Q16543 378 aaPredicted RBP14.25□□□□□ -0.13
LIMS2-210ENST00000413578 TRIM71Q2Q1W2 868 aaKnown RBP14.25□□□□□ -0.13
LIMS2-210ENST00000413578 LRRC8DQ7L1W4 858 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms