RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 PTPREP23469 700 aa10.98□□□□□ -0.65
SMPD4-203ENST00000412570 RCAN1P53805 252 aa10.98□□□□□ -0.65
SMPD4-203ENST00000412570 RRAGBQ5VZM2 374 aa10.98□□□□□ -0.65
SMPD4-203ENST00000412570 RNF207Q6ZRF8 634 aa10.98□□□□□ -0.65
SMPD4-203ENST00000412570 RMDN3Q96TC7 470 aa10.98□□□□□ -0.65
SMPD4-203ENST00000412570 FEM1BQ9UK73 627 aa10.98□□□□□ -0.65
SMPD4-203ENST00000412570 ARP10275 920 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 CCT6AP40227 531 aaKnown RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 COG2Q14746 738 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 Q3C1V9 767 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 USP50Q70EL3 339 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 PLA2G4DQ86XP0 818 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 ZNF668Q96K58 619 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 ZIC5Q96T25 663 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 GBA2Q9HCG7 927 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 DDX19AQ9NUU7 478 aaKnown RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 LAMB1P07942 1786 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 CCL15-CCL14A0A0B4J2E2 113 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 POTEB3A0JP26 581 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 POTEFA5A3E0 1075 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 E9PMD0 336 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 TBC1D12O60347 775 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 PLCG1P19174 1290 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 IBSPP21815 317 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 CMA1P23946 247 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 GJA5P36382 358 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 TXLNAP40222 546 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 CUL4BQ13620 913 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 CCL15Q16663 113 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 POTEBQ6S5H4 581 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 POTEGQ6S5H5 508 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 POTEEQ6S8J3 1075 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 CABP7Q86V35 215 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 KIAA1683Q9H0B3 1180 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 EFCC1Q9HA90 598 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 TXNRD2Q9NNW7 524 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 PPP1R9AQ9ULJ8 1098 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 LAMA2P24043 3122 aaKnown RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 GOLGA6L19H0YKK7 550 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 WDR46O15213 610 aaKnown RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.653e-6■□□□□ 9
SMPD4-203ENST00000412570 MCM6Q14566 821 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 LRRC41Q15345 812 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 METTL16Q86W50 562 aaKnown RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 CPA4Q9UI42 421 aa10.97□□□□□ -0.65
SMPD4-203ENST00000412570 SRPRBQ9Y5M8 271 aaKnown RBP10.97□□□□□ -0.65
SMPD4-203ENST00000412570 PNMA8AQ86V59 439 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-203ENST00000412570 C2orf69Q8N8R5 385 aa10.96□□□□□ -0.65
SMPD4-203ENST00000412570 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.65
SMPD4-203ENST00000412570 BANK1Q8NDB2 785 aa10.96□□□□□ -0.65
SMPD4-203ENST00000412570 IL27Q8NEV9 243 aa10.96□□□□□ -0.65
SMPD4-203ENST00000412570 BTBD7Q9P203 1132 aa10.96□□□□□ -0.65
SMPD4-203ENST00000412570 GJC2Q5T442 439 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-203ENST00000412570 KRBA2Q6ZNG9 492 aa10.96□□□□□ -0.65
SMPD4-203ENST00000412570 TRIM5Q9C035 493 aa10.96□□□□□ -0.65
SMPD4-203ENST00000412570 ASCC2Q9H1I8 757 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-203ENST00000412570 MRPL11Q9Y3B7 192 aaKnown RBP10.96□□□□□ -0.65
SMPD4-203ENST00000412570 AFG3L2Q9Y4W6 797 aa10.96□□□□□ -0.65
SMPD4-203ENST00000412570 ELP1O95163 1332 aa10.96□□□□□ -0.66
SMPD4-203ENST00000412570 PLIN4Q96Q06 1357 aa10.96□□□□□ -0.66
SMPD4-203ENST00000412570 SSC5DA1L4H1 1573 aa10.96□□□□□ -0.66
SMPD4-203ENST00000412570 USP14P54578 494 aa10.96□□□□□ -0.66
SMPD4-203ENST00000412570 ASIC1P78348 528 aa10.96□□□□□ -0.66
SMPD4-203ENST00000412570 ATP2C1P98194 919 aaPredicted RBP10.96□□□□□ -0.66
SMPD4-203ENST00000412570 UTP14CQ5TAP6 766 aaKnown RBP10.96□□□□□ -0.66
SMPD4-203ENST00000412570 RESP18Q5W5W9 173 aa10.96□□□□□ -0.66
SMPD4-203ENST00000412570 ENGASEQ8NFI3 743 aa10.96□□□□□ -0.66
SMPD4-203ENST00000412570 CBX8Q9HC52 389 aa10.96□□□□□ -0.66
SMPD4-203ENST00000412570 SPDYE16A6NNV3 312 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-203ENST00000412570 TMEM266Q2M3C6 531 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 PPP4R3BQ5MIZ7 849 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 KCNK18Q7Z418 384 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 GDAQ9Y2T3 454 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 ZNF536O15090 1300 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 SMC2O95347 1197 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 POSTNQ15063 836 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 DLEC1Q9Y238 1755 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 SIPA1L1O43166 1804 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 EDIL3O43854 480 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 PSMC6P62333 389 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 ECM1Q16610 540 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 TPD52L1Q16890 204 aaPredicted RBP10.95□□□□□ -0.66
SMPD4-203ENST00000412570 TMEM63BQ5T3F8 832 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 ERO1BQ86YB8 467 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 LRRC15Q8TF66 581 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 SMARCE1Q969G3 411 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 PPP1R16BQ96T49 567 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 PORCNQ9H237 461 aa10.95□□□□□ -0.66
SMPD4-203ENST00000412570 BRCA1P38398 1863 aaKnown RBP10.94□□□□□ -0.66
SMPD4-203ENST00000412570 PPP6R2O75170 966 aa10.94□□□□□ -0.66
SMPD4-203ENST00000412570 FILIP1Q7Z7B0 1213 aa10.94□□□□□ -0.66
SMPD4-203ENST00000412570 FAM160B2Q86V87 743 aa10.94□□□□□ -0.66
SMPD4-203ENST00000412570 TRIM44Q96DX7 344 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-203ENST00000412570 ZNF577Q9BSK1 485 aa10.94□□□□□ -0.66
SMPD4-203ENST00000412570 SH3GLB2Q9NR46 395 aa10.94□□□□□ -0.66
SMPD4-203ENST00000412570 KIAA1468Q9P260 1216 aa10.94□□□□□ -0.66
SMPD4-203ENST00000412570 TSKSQ9UJT2 592 aa10.94□□□□□ -0.66
SMPD4-203ENST00000412570 GAS7O60861 476 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms