RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 VTA1Q9NP79 307 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 PXMP2Q9NR77 195 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 PDGFCQ9NRA1 345 aa15.19■□□□□ 0.02
HDAC8-210ENST00000412342 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-210ENST00000412342 RBM47A0AV96 593 aaKnown RBP15.18■□□□□ 0.02
HDAC8-210ENST00000412342 hCG_1984214I3L0E3 225 aa15.18■□□□□ 0.02
HDAC8-210ENST00000412342 ADAMTS4O75173 837 aa15.18■□□□□ 0.02
HDAC8-210ENST00000412342 FARP2O94887 1054 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-210ENST00000412342 STK3Q13188 491 aa15.18■□□□□ 0.02
HDAC8-210ENST00000412342 ANKRD1Q15327 319 aa15.18■□□□□ 0.02
HDAC8-210ENST00000412342 ME3Q16798 604 aa15.18■□□□□ 0.02
HDAC8-210ENST00000412342 TMEM63BQ5T3F8 832 aa15.18■□□□□ 0.02
HDAC8-210ENST00000412342 USP17L6PQ6QN14 398 aa15.18■□□□□ 0.02
HDAC8-210ENST00000412342 ZNF713Q8N859 430 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-210ENST00000412342 NSUN6Q8TEA1 469 aaKnown RBP15.18■□□□□ 0.02
HDAC8-210ENST00000412342 PDCD2LQ9BRP1 358 aa15.18■□□□□ 0.02
HDAC8-210ENST00000412342 BARHL2Q9NY43 387 aa15.18■□□□□ 0.02
HDAC8-210ENST00000412342 FAM184BQ9ULE4 1060 aa15.18■□□□□ 0.02
HDAC8-210ENST00000412342 PPFIA3O75145 1194 aa15.17■□□□□ 0.02
HDAC8-210ENST00000412342 COL6A1P12109 1028 aa15.17■□□□□ 0.02
HDAC8-210ENST00000412342 SCG2P13521 617 aa15.17■□□□□ 0.02
HDAC8-210ENST00000412342 EIF2AK2P19525 551 aaKnown RBP15.17■□□□□ 0.02
HDAC8-210ENST00000412342 ADCYAP1R1P41586 468 aa15.17■□□□□ 0.02
HDAC8-210ENST00000412342 ST3GAL1Q11201 340 aa15.17■□□□□ 0.02
HDAC8-210ENST00000412342 EEPD1Q7L9B9 569 aa15.17■□□□□ 0.02
HDAC8-210ENST00000412342 IL31RAQ8NI17 732 aa15.17■□□□□ 0.02
HDAC8-210ENST00000412342 TBC1D32Q96NH3 1257 aa15.17■□□□□ 0.02
HDAC8-210ENST00000412342 IWS1Q96ST2 819 aa15.17■□□□□ 0.02
HDAC8-210ENST00000412342 RBM27Q9P2N5 1060 aaKnown RBP15.17■□□□□ 0.02
HDAC8-210ENST00000412342 GNEQ9Y223 722 aaKnown RBP15.17■□□□□ 0.02
HDAC8-210ENST00000412342 SYNRGQ9UMZ2 1314 aa15.17■□□□□ 0.02
HDAC8-210ENST00000412342 CTAGE5O15320 804 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 DUSP11O75319 330 aaKnown RBP15.16■□□□□ 0.02
HDAC8-210ENST00000412342 CTDNEP1O95476 244 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 NR3C2P08235 984 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 RARBP10826 455 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 SMPD1P17405 629 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 PTGS1P23219 599 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 NKX3-2P78367 333 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 PDE4DQ08499 809 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 PGM5Q15124 567 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 ARHGEF16Q5VV41 709 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 PAWRQ96IZ0 340 aaKnown RBP15.16■□□□□ 0.02
HDAC8-210ENST00000412342 SLC26A6Q9BXS9 759 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 UPF3AQ9H1J1 476 aaKnown RBP15.16■□□□□ 0.02
HDAC8-210ENST00000412342 PSTPIP2Q9H939 334 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 XPNPEP3Q9NQH7 507 aa15.16■□□□□ 0.02
HDAC8-210ENST00000412342 ESYT2A0FGR8 921 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 MYADML2A6NDP7 307 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 DNM1LO00429 736 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 ADAMTS3O15072 1205 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 RGS20O76081 388 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 PGK1P00558 417 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 NAPAP54920 295 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 IRX5P78411 483 aaPredicted RBP15.15■□□□□ 0.02
HDAC8-210ENST00000412342 MLLT1Q03111 559 aaPredicted RBP15.15■□□□□ 0.02
HDAC8-210ENST00000412342 LRRC41Q15345 812 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 UBE2SQ16763 222 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 CCSAPQ6IQ19 270 aaPredicted RBP15.15■□□□□ 0.02
HDAC8-210ENST00000412342 NOL8Q76FK4 1167 aaKnown RBP15.15■□□□□ 0.02
HDAC8-210ENST00000412342 VSIG10LQ86VR7 867 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 FCHSD1Q86WN1 690 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 TEX2Q8IWB9 1127 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 KLHDC9Q8NEP7 349 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 GTF3C6Q969F1 213 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 MPHOSPH6Q99547 160 aaKnown RBP15.15■□□□□ 0.02
HDAC8-210ENST00000412342 SLKQ9H2G2 1235 aaPredicted RBP15.15■□□□□ 0.02
HDAC8-210ENST00000412342 RIC8AQ9NPQ8 531 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 STK36Q9NRP7 1315 aa15.15■□□□□ 0.02
HDAC8-210ENST00000412342 B4DLN1 442 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 ARIH2O95376 493 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 CST5P28325 142 aaPredicted RBP15.14■□□□□ 0.01
HDAC8-210ENST00000412342 CLK2P49760 499 aaKnown RBP15.14■□□□□ 0.01
HDAC8-210ENST00000412342 MRPL12P52815 198 aaKnown RBP15.14■□□□□ 0.01
HDAC8-210ENST00000412342 GJA9P57773 515 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 MRPS9P82933 396 aaKnown RBP15.14■□□□□ 0.01
HDAC8-210ENST00000412342 TNFAIP2Q03169 654 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 RABEP1Q15276 862 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 STXBP2Q15833 593 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 DUSP28Q4G0W2 176 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 GJC2Q5T442 439 aaPredicted RBP15.14■□□□□ 0.01
HDAC8-210ENST00000412342 IQSEC1Q6DN90 963 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 CCDC62Q6P9F0 684 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 NECAB1Q8N987 351 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 SMARCC2Q8TAQ2 1214 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 CUL5Q93034 780 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 ZMYND12Q9H0C1 365 aa15.14■□□□□ 0.01
HDAC8-210ENST00000412342 SMCO2A6NFE2 343 aa15.13■□□□□ 0.01
HDAC8-210ENST00000412342 CPLX1O14810 134 aa15.13■□□□□ 0.01
HDAC8-210ENST00000412342 DTNBO60941 627 aa15.13■□□□□ 0.01
HDAC8-210ENST00000412342 EIF3JO75822 258 aaKnown RBP15.13■□□□□ 0.01
HDAC8-210ENST00000412342 DEXIO95424 95 aa15.13■□□□□ 0.01
HDAC8-210ENST00000412342 NECAB2Q7Z6G3 386 aa15.13■□□□□ 0.01
HDAC8-210ENST00000412342 ARRDC4Q8NCT1 418 aa15.13■□□□□ 0.01
HDAC8-210ENST00000412342 SCFD2Q8WU76 684 aa15.13■□□□□ 0.01
HDAC8-210ENST00000412342 WDR11Q9BZH6 1224 aa15.13■□□□□ 0.01
HDAC8-210ENST00000412342 C11orf49Q9H6J7 331 aa15.13■□□□□ 0.01
HDAC8-210ENST00000412342 UPF2Q9HAU5 1272 aaKnown RBP15.13■□□□□ 0.01
HDAC8-210ENST00000412342 FDPSP14324 419 aaKnown RBP15.12■□□□□ 0.01
HDAC8-210ENST00000412342 ADCY7P51828 1080 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms