RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 SENP2Q9HC62 589 aa19.33■□□□□ 0.68
SCAMP4-203ENST00000411971 TANC1Q9C0D5 1861 aa19.33■□□□□ 0.68
SCAMP4-203ENST00000411971 LOC102724159A0A0B4J2E5 919 aa19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 PPP1R11O60927 126 aaPredicted RBP19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 IRX6P78412 446 aaPredicted RBP19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 PTH1RQ03431 593 aa19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 PDE4DQ08499 809 aa19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 PWP2Q15269 919 aaKnown RBP19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 SEC23AQ15436 765 aa19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 SYTL5Q8TDW5 730 aaPredicted RBP19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 HERVK_113Q902F9 699 aa19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 ZNF576Q9H609 170 aa19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 KAT14Q9H8E8 782 aa19.32■□□□□ 0.68
SCAMP4-203ENST00000411971 TMEM265A0A087WTH1 108 aa19.31■□□□□ 0.68
SCAMP4-203ENST00000411971 FOSL2P15408 326 aa19.31■□□□□ 0.68
SCAMP4-203ENST00000411971 TTC22Q5TAA0 569 aa19.31■□□□□ 0.68
SCAMP4-203ENST00000411971 CCDC62Q6P9F0 684 aa19.31■□□□□ 0.68
SCAMP4-203ENST00000411971 OTOP2Q7RTS6 562 aa19.31■□□□□ 0.68
SCAMP4-203ENST00000411971 IQCA1Q86XH1 822 aa19.31■□□□□ 0.68
SCAMP4-203ENST00000411971 DNERQ8NFT8 737 aa19.31■□□□□ 0.68
SCAMP4-203ENST00000411971 TIFAQ96CG3 184 aa19.31■□□□□ 0.68
SCAMP4-203ENST00000411971 VAT1LQ9HCJ6 419 aa19.31■□□□□ 0.68
SCAMP4-203ENST00000411971 YBX2Q9Y2T7 364 aaKnown RBP19.31■□□□□ 0.68
SCAMP4-203ENST00000411971 ZEB2O60315 1214 aa19.3■□□□□ 0.68
SCAMP4-203ENST00000411971 IMMTQ16891 758 aaKnown RBP19.3■□□□□ 0.68
SCAMP4-203ENST00000411971 NBPF20Q3BBV1 942 aa19.3■□□□□ 0.68
SCAMP4-203ENST00000411971 PSRC1Q6PGN9 363 aaPredicted RBP19.3■□□□□ 0.68
SCAMP4-203ENST00000411971 RGS22Q8NE09 1264 aa19.3■□□□□ 0.68
SCAMP4-203ENST00000411971 PRDM6Q9NQX0 595 aa19.3■□□□□ 0.68
SCAMP4-203ENST00000411971 A6NJR5 290 aa19.29■□□□□ 0.68
SCAMP4-203ENST00000411971 TXNP10599 105 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-203ENST00000411971 COL9A3Q14050 684 aaPredicted RBP19.29■□□□□ 0.68
SCAMP4-203ENST00000411971 PPP2R5BQ15173 497 aa19.29■□□□□ 0.68
SCAMP4-203ENST00000411971 LY6KQ17RY6 165 aa19.29■□□□□ 0.68
SCAMP4-203ENST00000411971 ASPRV1Q53RT3 343 aa19.29■□□□□ 0.68
SCAMP4-203ENST00000411971 SCFD2Q8WU76 684 aa19.29■□□□□ 0.68
SCAMP4-203ENST00000411971 CTAGE1Q96RT6 745 aa19.29■□□□□ 0.68
SCAMP4-203ENST00000411971 POLR3EQ9NVU0 708 aa19.29■□□□□ 0.68
SCAMP4-203ENST00000411971 ABCB11O95342 1321 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 HIP1O00291 1037 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 FGBP02675 491 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 MYOGP15173 224 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 RABGGTBP53611 331 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 ADGRE1Q14246 886 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 TTLL4Q14679 1199 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 STOX1Q6ZVD7 989 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 MTG1Q9BT17 334 aaPredicted RBP19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 PRDM12Q9H4Q4 367 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 MAD2L2Q9UI95 211 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 DOCK5Q9H7D0 1870 aa19.28■□□□□ 0.68
SCAMP4-203ENST00000411971 CYP21A2P08686 494 aa19.27■□□□□ 0.68
SCAMP4-203ENST00000411971 PARP1P09874 1014 aaKnown RBP19.27■□□□□ 0.68
SCAMP4-203ENST00000411971 CHMLP26374 656 aa19.27■□□□□ 0.68
SCAMP4-203ENST00000411971 CPT1AP50416 773 aa19.27■□□□□ 0.68
SCAMP4-203ENST00000411971 ARHGAP1Q07960 439 aa19.27■□□□□ 0.68
SCAMP4-203ENST00000411971 SEPT14Q6ZU15 432 aa19.27■□□□□ 0.68
SCAMP4-203ENST00000411971 FBXO11Q86XK2 927 aa19.27■□□□□ 0.68
SCAMP4-203ENST00000411971 AFG1LQ8WV93 481 aa19.27■□□□□ 0.68
SCAMP4-203ENST00000411971 MTMR8Q96EF0 704 aa19.27■□□□□ 0.68
SCAMP4-203ENST00000411971 NKX2-4Q9H2Z4 354 aa19.27■□□□□ 0.68
SCAMP4-203ENST00000411971 EIF2AK2P19525 551 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-203ENST00000411971 CCDC178Q5BJE1 867 aa19.26■□□□□ 0.67
SCAMP4-203ENST00000411971 FAM47CQ5HY64 1035 aa19.26■□□□□ 0.67
SCAMP4-203ENST00000411971 IFIT1BQ5T764 474 aaKnown RBP19.26■□□□□ 0.67
SCAMP4-203ENST00000411971 KAT2BQ92831 832 aa19.26■□□□□ 0.67
SCAMP4-203ENST00000411971 KRT23Q9C075 422 aa19.26■□□□□ 0.67
SCAMP4-203ENST00000411971 CTNNA3Q9UI47 895 aa19.26■□□□□ 0.67
SCAMP4-203ENST00000411971 PNMA2Q9UL42 364 aa19.26■□□□□ 0.67
SCAMP4-203ENST00000411971 TRANK1O15050 2925 aa19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 PALM3A6NDB9 673 aaPredicted RBP19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 KLRF2D3W0D1 207 aa19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 NKRFO15226 690 aaKnown RBP eCLIP19.25■□□□□ 0.672e-6■□□□□ 8.4
SCAMP4-203ENST00000411971 CYTH3O43739 400 aa19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 DHX16O60231 1041 aaKnown RBP19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 RGS20O76081 388 aa19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 CHST3Q7LGC8 479 aa19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 DEFB128Q7Z7B8 93 aa19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 IL31RAQ8NI17 732 aa19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 ZFP91Q96JP5 570 aaPredicted RBP19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 RMDN3Q96TC7 470 aa19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 UBAC1Q9BSL1 405 aa19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 MUC3AQ02505 3323 aa19.25■□□□□ 0.67
SCAMP4-203ENST00000411971 ARHGEF15O94989 841 aa19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 CFBP00751 764 aa19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 MMP3P08254 477 aa19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 HSD17B4P51659 736 aa19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 ANTXR2P58335 489 aa19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 GPNMBQ14956 572 aa19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 NSUN6Q8TEA1 469 aaKnown RBP19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 SEZ6LQ9BYH1 1024 aa19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 CNNM2Q9H8M5 875 aa19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 PXMP2Q9NR77 195 aa19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 DDX41Q9UJV9 622 aaKnown RBP19.24■□□□□ 0.67
SCAMP4-203ENST00000411971 TTC28Q96AY4 2481 aa19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 HOXA13P31271 388 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 NT5C2P49902 561 aa19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 CHMP4BP1P59074 171 aa19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 GHRHRQ02643 423 aa19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 GDF6Q6KF10 455 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 NFRKBQ6P4R8 1299 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms