RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 FANCBQ8NB91 859 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 GIMAP8Q8ND71 665 aaPredicted RBP3.52□□□□□ -1.85
CUL3-204ENST00000409777 OR8K1Q8NGG5 319 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.52□□□□□ -1.85
CUL3-204ENST00000409777 PIK3R5Q8WYR1 880 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 HLA-CQ95604 372 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 EPSTI1Q96J88 318 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 CHP1Q99653 195 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 SLC26A6Q9BXS9 759 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 ZBTB3Q9H5J0 574 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 KAT14Q9H8E8 782 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 MAGEF1Q9HAY2 307 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 KBTBD4Q9NVX7 518 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 RMND1Q9NWS8 449 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 RABGEF1Q9UJ41 708 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 SNX12Q9UMY4 172 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.52□□□□□ -1.85
CUL3-204ENST00000409777 SLC12A7Q9Y666 1083 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 SAR1BQ9Y6B6 198 aa3.52□□□□□ -1.85
CUL3-204ENST00000409777 COL14A1Q05707 1796 aaKnown RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 FLT1P17948 1338 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 MROH5Q6ZUA9 1318 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 NRAPQ86VF7 1730 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 PDE8BO95263 885 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 PAEPP09466 180 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 LONP1P36776 959 aaKnown RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 CTSWP56202 376 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 TROAPQ12815 778 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 PAK1Q13153 545 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 DRP2Q13474 957 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 SAFBQ15424 915 aaKnown RBP eCLIP3.51□□□□□ -1.85
CUL3-204ENST00000409777 TTMPQ5BVD1 217 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 WLSQ5T9L3 541 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 WWC2Q6AWC2 1192 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 MICU3Q86XE3 530 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 ZNF654Q8IZM8 581 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 ANKS1AQ92625 1134 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 C8orf37Q96NL8 207 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 MYCBPQ99417 103 aaPredicted RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 DUSP9Q99956 384 aaKnown RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 NUP58Q9BVL2 599 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 SH3GLB2Q9NR46 395 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 RBM28Q9NW13 759 aaKnown RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 TMEM59LQ9UK28 342 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 KCNJ14Q9UNX9 436 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 ROBO3Q96MS0 1386 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 QSER1Q2KHR3 1735 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 C5orf60A6NFR6 353 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 BTNL10A8MVZ5 291 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 ORC4O43929 436 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 PARP1P09874 1014 aaKnown RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 RHOXF2BP0C7M4 288 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 SLC5A1P13866 664 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 KRT2P35908 639 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 PRPHP41219 470 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 VAV2P52735 878 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 CABP4P57796 275 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 KRT83P78385 493 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 ZBED6P86452 979 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 FKBP4Q02790 459 aaKnown RBP eCLIP3.51□□□□□ -1.85
CUL3-204ENST00000409777 GNL2Q13823 731 aaKnown RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 CRTC2Q53ET0 693 aaPredicted RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 SPECC1Q5M775 1068 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 HAUS3Q68CZ6 603 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 TMTC3Q6ZXV5 915 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 TAX1BP1Q86VP1 789 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 NLRP10Q86W26 655 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 RAB11FIP4Q86YS3 637 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 TRIM22Q8IYM9 498 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 DEPDC4Q8N2C3 294 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 LRRC15Q8TF66 581 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 LPIN2Q92539 896 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 DHTKD1Q96HY7 919 aaPredicted RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 RHOXF2Q9BQY4 288 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 EDEM3Q9BZQ6 932 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 TSGA10Q9BZW7 698 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 CCSER1Q9C0I3 900 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 CUEDC2Q9H467 287 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 SH2D4AQ9H788 454 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 TRIM10Q9UDY6 481 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 NENFQ9UMX5 172 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 CTNND2Q9UQB3 1225 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 VPS9D1Q9Y2B5 631 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 SIK3Q9Y2K2 1263 aa3.51□□□□□ -1.85
CUL3-204ENST00000409777 COL16A1Q07092 1604 aaPredicted RBP3.51□□□□□ -1.85
CUL3-204ENST00000409777 NUTM2BA6NNL0 878 aaPredicted RBP3.5□□□□□ -1.85
CUL3-204ENST00000409777 NUTM2EB1AL46 878 aaPredicted RBP3.5□□□□□ -1.85
CUL3-204ENST00000409777 ERVV-1B6SEH8 477 aa3.5□□□□□ -1.85
CUL3-204ENST00000409777 RASSF9O75901 435 aa3.5□□□□□ -1.85
CUL3-204ENST00000409777 RPN1P04843 607 aaKnown RBP3.5□□□□□ -1.85
CUL3-204ENST00000409777 CDC25AP30304 524 aa3.5□□□□□ -1.85
CUL3-204ENST00000409777 HNRNPH1P31943 449 aaKnown RBP3.5□□□□□ -1.85
CUL3-204ENST00000409777 KRT9P35527 623 aa3.5□□□□□ -1.85
CUL3-204ENST00000409777 PPP1R2P41236 205 aa3.5□□□□□ -1.85
CUL3-204ENST00000409777 PRCPP42785 496 aa3.5□□□□□ -1.85
CUL3-204ENST00000409777 PSEN2P49810 448 aa3.5□□□□□ -1.85
CUL3-204ENST00000409777 DNM2P50570 870 aa3.5□□□□□ -1.85
CUL3-204ENST00000409777 GTF2A1P52655 376 aaPredicted RBP3.5□□□□□ -1.85
CUL3-204ENST00000409777 EPHB4P54760 987 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms