RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 TRAF1Q13077 416 aa17.17■□□□□ 0.34
CBX3-203ENST00000409747 SART3Q15020 963 aaKnown RBP17.17■□□□□ 0.34
CBX3-203ENST00000409747 SYTL5Q8TDW5 730 aaPredicted RBP17.17■□□□□ 0.34
CBX3-203ENST00000409747 NOC4LQ9BVI4 516 aaKnown RBP17.17■□□□□ 0.34
CBX3-203ENST00000409747 TRPV6Q9H1D0 765 aa17.17■□□□□ 0.34
CBX3-203ENST00000409747 TTYH1Q9H313 450 aaPredicted RBP17.17■□□□□ 0.34
CBX3-203ENST00000409747 VAT1LQ9HCJ6 419 aa17.17■□□□□ 0.34
CBX3-203ENST00000409747 UNC80Q8N2C7 3258 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 A6NJR5 290 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 KLRF2D3W0D1 207 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 CYP21A2P08686 494 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 STXBP2Q15833 593 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 RASIP1Q5U651 963 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 CYB5R4Q7L1T6 521 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 RMDN3Q96TC7 470 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 CDH23Q9H251 3354 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 IRX6P78412 446 aaPredicted RBP17.16■□□□□ 0.34
CBX3-203ENST00000409747 ARHGEF16Q5VV41 709 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 ZNF365Q70YC5 407 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 NCOA7Q8NI08 942 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 TAAR1Q96RJ0 339 aa17.16■□□□□ 0.34
CBX3-203ENST00000409747 MAP3K20Q9NYL2 800 aaKnown RBP17.16■□□□□ 0.34
CBX3-203ENST00000409747 SCN10AQ9Y5Y9 1956 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 DLL1O00548 723 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 IFIT3O14879 490 aaKnown RBP17.15■□□□□ 0.34
CBX3-203ENST00000409747 ZBTB5O15062 677 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 SGSM2O43147 1006 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 ACRP10323 421 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 NFRKBQ6P4R8 1299 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 RPUSD2Q8IZ73 545 aaKnown RBP17.15■□□□□ 0.34
CBX3-203ENST00000409747 STAG2Q8N3U4 1231 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 SAMD3Q8N6K7 520 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 HERVK_113Q902F9 699 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 TIFAQ96CG3 184 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 MAD2L2Q9UI95 211 aa17.15■□□□□ 0.34
CBX3-203ENST00000409747 EYSQ5T1H1 3165 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 CFBP00751 764 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 FGBP02675 491 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 FOSL2P15408 326 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 GHRHRQ02643 423 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 PTH1RQ03431 593 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 PTPN11Q06124 597 aaPredicted RBP17.14■□□□□ 0.33
CBX3-203ENST00000409747 FAM47CQ5HY64 1035 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 MYLIPQ8WY64 445 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 TBC1D5Q92609 795 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 MTMR8Q96EF0 704 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 COL20A1Q9P218 1284 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 KIAA1217Q5T5P2 1943 aa17.14■□□□□ 0.33
CBX3-203ENST00000409747 UMODL1Q5DID0 1318 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 PALM3A6NDB9 673 aaPredicted RBP17.13■□□□□ 0.33
CBX3-203ENST00000409747 ARIH2O95376 493 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 GH1P01241 217 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 PFKMP08237 780 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 HSD17B4P51659 736 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 CCL23P55773 120 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 GRM4Q14833 912 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 WTAPQ15007 396 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 CCDC62Q6P9F0 684 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 SEPT14Q6ZU15 432 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 MAFAQ8NHW3 353 aaPredicted RBP17.13■□□□□ 0.33
CBX3-203ENST00000409747 COPS5Q92905 334 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 WNT8AQ9H1J5 351 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 PXMP2Q9NR77 195 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 TRMT13Q9NUP7 481 aaKnown RBP17.13■□□□□ 0.33
CBX3-203ENST00000409747 PCDHA1Q9Y5I3 950 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 E7EWF7 191 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 EIF3JO75822 258 aaKnown RBP17.13■□□□□ 0.33
CBX3-203ENST00000409747 RAB30Q15771 203 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 NBPF20Q3BBV1 942 aa17.13■□□□□ 0.33
CBX3-203ENST00000409747 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.13■□□□□ 0.33
CBX3-203ENST00000409747 EIF2AK2P19525 551 aaKnown RBP17.12■□□□□ 0.33
CBX3-203ENST00000409747 CATIPQ7Z7H3 387 aa17.12■□□□□ 0.33
CBX3-203ENST00000409747 PBX4Q9BYU1 374 aa17.12■□□□□ 0.33
CBX3-203ENST00000409747 ZNF576Q9H609 170 aa17.12■□□□□ 0.33
CBX3-203ENST00000409747 MSRAQ9UJ68 235 aa17.12■□□□□ 0.33
CBX3-203ENST00000409747 NOD1Q9Y239 953 aa17.12■□□□□ 0.33
CBX3-203ENST00000409747 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 NR3C2P08235 984 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 MMP3P08254 477 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 CYP2C9P11712 490 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 RFC2P35250 354 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 ARHGAP1Q07960 439 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 LY6KQ17RY6 165 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 TMEM67Q5HYA8 995 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 HOMER1Q86YM7 354 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 AFG1LQ8WV93 481 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 MAP4K1Q92918 833 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 RIOX1Q9H6W3 641 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 MRVI1Q9Y6F6 885 aa17.11■□□□□ 0.33
CBX3-203ENST00000409747 OPLAHO14841 1288 aa17.1■□□□□ 0.33
CBX3-203ENST00000409747 CASTP20810 708 aaKnown RBP17.1■□□□□ 0.33
CBX3-203ENST00000409747 KCNV1Q6PIU1 500 aa17.1■□□□□ 0.33
CBX3-203ENST00000409747 OTOP2Q7RTS6 562 aa17.1■□□□□ 0.33
CBX3-203ENST00000409747 EMID1Q96A84 441 aaPredicted RBP17.1■□□□□ 0.33
CBX3-203ENST00000409747 TANC1Q9C0D5 1861 aa17.1■□□□□ 0.33
CBX3-203ENST00000409747 PPP1R11O60927 126 aaPredicted RBP17.1■□□□□ 0.33
CBX3-203ENST00000409747 TROAPQ12815 778 aa17.1■□□□□ 0.33
CBX3-203ENST00000409747 BFSP2Q13515 415 aa17.1■□□□□ 0.33
CBX3-203ENST00000409747 DGKDQ16760 1214 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms