RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 NSUN6Q8TEA1 469 aaKnown RBP22.43■■□□□ 1.18
SMARCB1-204ENST00000407422 SCFD2Q8WU76 684 aa22.43■■□□□ 1.18
SMARCB1-204ENST00000407422 RMDN3Q96TC7 470 aa22.43■■□□□ 1.18
SMARCB1-204ENST00000407422 A0A0C4DFX4 3053 aa22.43■■□□□ 1.18
SMARCB1-204ENST00000407422 B4DLN1 442 aa22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 CYTH3O43739 400 aa22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 CFBP00751 764 aa22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 MRPL12P52815 198 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 PIGSQ96S52 555 aa22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 TLR3O15455 904 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 TXNP10599 105 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 PURAQ00577 322 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 MFSD5Q6N075 450 aa22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 PPP1R12CQ9BZL4 782 aa22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 RIOX1Q9H6W3 641 aa22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 MTMR10Q9NXD2 777 aa22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 PCDHA1Q9Y5I3 950 aa22.42■■□□□ 1.18
SMARCB1-204ENST00000407422 SLC27A2O14975 620 aa22.41■■□□□ 1.18
SMARCB1-204ENST00000407422 EIF2AK2P19525 551 aaKnown RBP22.41■■□□□ 1.18
SMARCB1-204ENST00000407422 CPT1AP50416 773 aa22.41■■□□□ 1.18
SMARCB1-204ENST00000407422 BMP2KLQ5H9B9 411 aa22.41■■□□□ 1.18
SMARCB1-204ENST00000407422 SEPT14Q6ZU15 432 aa22.41■■□□□ 1.18
SMARCB1-204ENST00000407422 CATIPQ7Z7H3 387 aa22.41■■□□□ 1.18
SMARCB1-204ENST00000407422 TRPV6Q9H1D0 765 aa22.41■■□□□ 1.18
SMARCB1-204ENST00000407422 LY9Q9HBG7 655 aa22.41■■□□□ 1.18
SMARCB1-204ENST00000407422 NKRFO15226 690 aaKnown RBP eCLIP22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 MYL3P08590 195 aa22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 HSD17B4P51659 736 aa22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 TTLL4Q14679 1199 aa22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 ARHGEF16Q5VV41 709 aa22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 CCDC62Q6P9F0 684 aa22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 RNPC3Q96LT9 517 aaKnown RBP22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 IWS1Q96ST2 819 aa22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 MYL10Q9BUA6 226 aa22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 ANO2Q9NQ90 1003 aa22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 SCN10AQ9Y5Y9 1956 aa22.4■■□□□ 1.18
SMARCB1-204ENST00000407422 PRC1O43663 620 aa22.39■■□□□ 1.18
SMARCB1-204ENST00000407422 B4GALT4O60513 344 aa22.39■■□□□ 1.18
SMARCB1-204ENST00000407422 CSF2RAP15509 400 aa22.39■■□□□ 1.18
SMARCB1-204ENST00000407422 HOXA13P31271 388 aaPredicted RBP22.39■■□□□ 1.18
SMARCB1-204ENST00000407422 CYP2C18P33260 490 aa22.39■■□□□ 1.18
SMARCB1-204ENST00000407422 NECTIN1Q15223 517 aa22.39■■□□□ 1.18
SMARCB1-204ENST00000407422 CREB3L3Q68CJ9 461 aa22.39■■□□□ 1.18
SMARCB1-204ENST00000407422 PXMP2Q9NR77 195 aa22.39■■□□□ 1.18
SMARCB1-204ENST00000407422 POLR3EQ9NVU0 708 aa22.39■■□□□ 1.18
SMARCB1-204ENST00000407422 GHRHRQ02643 423 aa22.39■■□□□ 1.17
SMARCB1-204ENST00000407422 STXBP2Q15833 593 aa22.39■■□□□ 1.17
SMARCB1-204ENST00000407422 LY6KQ17RY6 165 aa22.39■■□□□ 1.17
SMARCB1-204ENST00000407422 C16orf59Q7L2K0 433 aa22.39■■□□□ 1.17
SMARCB1-204ENST00000407422 PPP1R13LQ8WUF5 828 aa22.39■■□□□ 1.17
SMARCB1-204ENST00000407422 PIBF1Q8WXW3 757 aa22.39■■□□□ 1.17
SMARCB1-204ENST00000407422 FAM161BQ96MY7 647 aa22.39■■□□□ 1.17
SMARCB1-204ENST00000407422 UMODL1Q5DID0 1318 aa22.38■■□□□ 1.17
SMARCB1-204ENST00000407422 MYH7BA7E2Y1 1941 aa22.38■■□□□ 1.17
SMARCB1-204ENST00000407422 A6NJR5 290 aa22.38■■□□□ 1.17
SMARCB1-204ENST00000407422 NR3C2P08235 984 aa22.38■■□□□ 1.17
SMARCB1-204ENST00000407422 CASC1Q6TDU7 716 aa22.38■■□□□ 1.17
SMARCB1-204ENST00000407422 ZNF654Q8IZM8 581 aa22.38■■□□□ 1.17
SMARCB1-204ENST00000407422 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.38■■□□□ 1.17
SMARCB1-204ENST00000407422 ALDH8A1Q9H2A2 487 aaPredicted RBP22.38■■□□□ 1.17
SMARCB1-204ENST00000407422 UNC80Q8N2C7 3258 aa22.37■■□□□ 1.17
SMARCB1-204ENST00000407422 PNMA6FA0A0J9YX94 578 aa22.37■■□□□ 1.17
SMARCB1-204ENST00000407422 MCM5P33992 734 aa22.37■■□□□ 1.17
SMARCB1-204ENST00000407422 FAM109BQ6ICB4 259 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-204ENST00000407422 MTG1Q9BT17 334 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-204ENST00000407422 SEZ6LQ9BYH1 1024 aa22.37■■□□□ 1.17
SMARCB1-204ENST00000407422 HIPK3Q9H422 1215 aa22.37■■□□□ 1.17
SMARCB1-204ENST00000407422 TRMT13Q9NUP7 481 aaKnown RBP22.37■■□□□ 1.17
SMARCB1-204ENST00000407422 SH2B2O14492 632 aaPredicted RBP22.36■■□□□ 1.17
SMARCB1-204ENST00000407422 PPIGQ13427 754 aaKnown RBP eCLIP22.36■■□□□ 1.172e-8■■□□□ 13.4
SMARCB1-204ENST00000407422 BRDTQ58F21 947 aaPredicted RBP22.36■■□□□ 1.17
SMARCB1-204ENST00000407422 TMEM199Q8N511 208 aa22.36■■□□□ 1.17
SMARCB1-204ENST00000407422 EIF3JO75822 258 aaKnown RBP22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 ACRP10323 421 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 SMAD3P84022 425 aaKnown RBP22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 AFG1LQ8WV93 481 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 PDCD2LQ9BRP1 358 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 NOC4LQ9BVI4 516 aaKnown RBP22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 PRUNE2Q8WUY3 3088 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 DDAH1O94760 285 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 MYCLP12524 364 aaPredicted RBP22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 ARHGAP1Q07960 439 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 NBPF20Q3BBV1 942 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 TMEM240Q5SV17 173 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 IL31RAQ8NI17 732 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 CTCFLQ8NI51 663 aaPredicted RBP22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 GUCD1Q96NT3 240 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 MAP3K14Q99558 947 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 MTA3Q9BTC8 594 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 LRRC2Q9BYS8 371 aa22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 MAP3K20Q9NYL2 800 aaKnown RBP22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 DDX41Q9UJV9 622 aaKnown RBP22.35■■□□□ 1.17
SMARCB1-204ENST00000407422 RGS20O76081 388 aa22.34■■□□□ 1.17
SMARCB1-204ENST00000407422 GH1P01241 217 aa22.34■■□□□ 1.17
SMARCB1-204ENST00000407422 RXRAP19793 462 aa22.34■■□□□ 1.17
SMARCB1-204ENST00000407422 CCL23P55773 120 aa22.34■■□□□ 1.17
SMARCB1-204ENST00000407422 NFXL1Q6ZNB6 911 aa22.34■■□□□ 1.17
SMARCB1-204ENST00000407422 TMEM87BQ96K49 555 aa22.34■■□□□ 1.17
SMARCB1-204ENST00000407422 GCOM1H8Y6P7 765 aaPredicted RBP22.33■■□□□ 1.17
SMARCB1-204ENST00000407422 KPNA6O60684 536 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms