RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CPP00450 1065 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 MFAP3P55082 362 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 STX1BP61266 288 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 PDE1BQ01064 536 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 ICA1Q05084 483 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 ABCB5Q2M3G0 1257 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 CMTR1Q8N1G2 835 aaKnown RBP13.1□□□□□ -0.31
SMCR8-201ENST00000406438 PDCD7Q8N8D1 485 aaKnown RBP13.1□□□□□ -0.31
SMCR8-201ENST00000406438 GCNAQ96QF7 691 aa13.1□□□□□ -0.31
SMCR8-201ENST00000406438 TCP10L2B9ZVM9 353 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 TTLL7Q6ZT98 887 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 RASEFQ8IZ41 740 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 SDR42E1Q8WUS8 393 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 AP5M1Q9H0R1 490 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 POC1B-GALNT4F8VUJ3 575 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 KIAA1841Q6NSI8 718 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
SMCR8-201ENST00000406438 RFX6Q8HWS3 928 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 ZBTB38Q8NAP3 1195 aaPredicted RBP13.09□□□□□ -0.31
SMCR8-201ENST00000406438 NRBF2Q96F24 287 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 GPC4O75487 556 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 YWHAGP61981 247 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMCR8-201ENST00000406438 CCNA1P78396 465 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 ZSCAN26Q16670 478 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 HP1BP3Q5SSJ5 553 aaPredicted RBP13.09□□□□□ -0.31
SMCR8-201ENST00000406438 TTC25Q96NG3 672 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 THRAP3Q9Y2W1 955 aaKnown RBP13.09□□□□□ -0.31
SMCR8-201ENST00000406438 GADD45BO75293 160 aaPredicted RBP13.09□□□□□ -0.31
SMCR8-201ENST00000406438 PFKFB1P16118 471 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 PPP1R2P3Q6NXS1 205 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 IFNL3Q8IZI9 196 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 CCDC24Q8N4L8 307 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 EFHD1Q9BUP0 239 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 LRFN2Q9ULH4 789 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 SEC24BO95487 1268 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 ME3Q16798 604 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 HSP90AA5PQ58FG0 334 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 GSTA4O15217 222 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 KPNA2P52292 529 aaKnown RBP13.09□□□□□ -0.31
SMCR8-201ENST00000406438 GNGT1P63211 74 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 PTGDRQ13258 359 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 APOL6Q9BWW8 343 aa13.09□□□□□ -0.31
SMCR8-201ENST00000406438 ADD3Q9UEY8 706 aaKnown RBP13.09□□□□□ -0.31
SMCR8-201ENST00000406438 PNMA6EA0A0J9YXQ4 647 aa13.08□□□□□ -0.31
SMCR8-201ENST00000406438 EFCAB8A8MWE9 144 aa13.08□□□□□ -0.31
SMCR8-201ENST00000406438 MAPKBP1O60336 1514 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 ADCY9O60503 1353 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 PTPROQ16827 1216 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 DNAAF3Q8N9W5 541 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 CCHCR1Q8TD31 782 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 SLC39A2Q9NP94 309 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 USP19O94966 1318 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 KLC3Q6P597 504 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 KCTD6Q8NC69 237 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 ATP6V0A1Q93050 837 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 KIAA1024Q9UPX6 916 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 MAP2K2P36507 400 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 ODR4Q5SWX8 454 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 ZNF577Q9BSK1 485 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 TM6SF1Q9BZW5 370 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 GON4LQ3T8J9 2241 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 TTI1O43156 1089 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 OSBPP22059 807 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 ZBTB17Q13105 803 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 SLC12A1Q13621 1099 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 CUEDC2Q9H467 287 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 SLC13A4Q9UKG4 626 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 BCS1LQ9Y276 419 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 KIF24Q5T7B8 1368 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 PMLP29590 882 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMCR8-201ENST00000406438 ASPRV1Q53RT3 343 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 ARHGAP27Q6ZUM4 889 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 LRRC8AQ8IWT6 810 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 FGD4Q96M96 766 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 EIF2AQ9BY44 585 aaKnown RBP13.08□□□□□ -0.32
SMCR8-201ENST00000406438 WDR62O43379 1518 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 HNRNPCL2B2RXH8 293 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 GTPBP6O43824 516 aaPredicted RBP13.08□□□□□ -0.32
SMCR8-201ENST00000406438 HNRNPCL1O60812 293 aaKnown RBP13.08□□□□□ -0.32
SMCR8-201ENST00000406438 CCND2P30279 289 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 ESRRGP62508 458 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 ELMSAN1Q6PJG2 1045 aa13.08□□□□□ -0.32
SMCR8-201ENST00000406438 MLH3Q9UHC1 1453 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 SHANK2Q9UPX8 1470 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 TTLL1O95922 423 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 ZSCAN20P17040 1043 aaPredicted RBP13.07□□□□□ -0.32
SMCR8-201ENST00000406438 MYO1EQ12965 1108 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 RCN2Q14257 317 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 MYLK4Q86YV6 388 aaPredicted RBP13.07□□□□□ -0.32
SMCR8-201ENST00000406438 PCDHA1Q9Y5I3 950 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 MAPK4P31152 587 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 SCNN1DP51172 638 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 C1orf228Q6PIY5 440 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 FANCBQ8NB91 859 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 SLC7A3Q8WY07 619 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 DPH5Q9H2P9 285 aa13.07□□□□□ -0.32
SMCR8-201ENST00000406438 ZNF215Q9UL58 517 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms