RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 SCG2P13521 617 aa18.31■□□□□ 0.52
GDPD3-202ENST00000406256 TMEM63BQ5T3F8 832 aa18.31■□□□□ 0.52
GDPD3-202ENST00000406256 USP17L6PQ6QN14 398 aa18.31■□□□□ 0.52
GDPD3-202ENST00000406256 FBXO16Q8IX29 292 aaPredicted RBP18.31■□□□□ 0.52
GDPD3-202ENST00000406256 NECAB1Q8N987 351 aa18.31■□□□□ 0.52
GDPD3-202ENST00000406256 IL31RAQ8NI17 732 aa18.31■□□□□ 0.52
GDPD3-202ENST00000406256 GTF3C6Q969F1 213 aa18.31■□□□□ 0.52
GDPD3-202ENST00000406256 PDGFCQ9NRA1 345 aa18.31■□□□□ 0.52
GDPD3-202ENST00000406256 DOCK5Q9H7D0 1870 aa18.31■□□□□ 0.52
GDPD3-202ENST00000406256 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
GDPD3-202ENST00000406256 hCG_1984214I3L0E3 225 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 POLR2MP0CAP2 368 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 PTGS1P23219 599 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 RABEP1Q15276 862 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 ANO1Q5XXA6 986 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 PPP1R18Q6NYC8 613 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 ZNF713Q8N859 430 aaPredicted RBP18.3■□□□□ 0.52
GDPD3-202ENST00000406256 RMDN3Q96TC7 470 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 PDCD2LQ9BRP1 358 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 SLC26A6Q9BXS9 759 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
GDPD3-202ENST00000406256 ZHX1Q9UKY1 873 aaPredicted RBP18.3■□□□□ 0.52
GDPD3-202ENST00000406256 CNPY2Q9Y2B0 182 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.3■□□□□ 0.52
GDPD3-202ENST00000406256 RBM47A0AV96 593 aaKnown RBP18.3■□□□□ 0.52
GDPD3-202ENST00000406256 CNGA1P29973 690 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 UBE2SQ16763 222 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 EEPD1Q7L9B9 569 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 NSUN6Q8TEA1 469 aaKnown RBP18.3■□□□□ 0.52
GDPD3-202ENST00000406256 AIFM3Q96NN9 605 aa18.3■□□□□ 0.52
GDPD3-202ENST00000406256 RGS20O76081 388 aa18.29■□□□□ 0.52
GDPD3-202ENST00000406256 FDPSP14324 419 aaKnown RBP18.29■□□□□ 0.52
GDPD3-202ENST00000406256 AKR1A1P14550 325 aa18.29■□□□□ 0.52
GDPD3-202ENST00000406256 EIF2AK2P19525 551 aaKnown RBP18.29■□□□□ 0.52
GDPD3-202ENST00000406256 NAPAP54920 295 aa18.29■□□□□ 0.52
GDPD3-202ENST00000406256 DIS3LQ8TF46 1054 aaKnown RBP18.29■□□□□ 0.52
GDPD3-202ENST00000406256 PSTPIP2Q9H939 334 aa18.29■□□□□ 0.52
GDPD3-202ENST00000406256 UPF2Q9HAU5 1272 aaKnown RBP18.29■□□□□ 0.52
GDPD3-202ENST00000406256 VTA1Q9NP79 307 aa18.29■□□□□ 0.52
GDPD3-202ENST00000406256 RIC8AQ9NPQ8 531 aa18.29■□□□□ 0.52
GDPD3-202ENST00000406256 RBM27Q9P2N5 1060 aaKnown RBP18.29■□□□□ 0.52
GDPD3-202ENST00000406256 CEP290O15078 2479 aa18.28■□□□□ 0.52
GDPD3-202ENST00000406256 ESYT2A0FGR8 921 aa18.28■□□□□ 0.52
GDPD3-202ENST00000406256 MSCO60682 206 aa18.28■□□□□ 0.52
GDPD3-202ENST00000406256 ADAMTS4O75173 837 aa18.28■□□□□ 0.52
GDPD3-202ENST00000406256 NR3C2P08235 984 aa18.28■□□□□ 0.52
GDPD3-202ENST00000406256 ADCYAP1R1P41586 468 aa18.28■□□□□ 0.52
GDPD3-202ENST00000406256 CLK2P49760 499 aaKnown RBP18.28■□□□□ 0.52
GDPD3-202ENST00000406256 IRX5P78411 483 aaPredicted RBP18.28■□□□□ 0.52
GDPD3-202ENST00000406256 PGM5Q15124 567 aa18.28■□□□□ 0.52
GDPD3-202ENST00000406256 FCHSD1Q86WN1 690 aa18.28■□□□□ 0.52
GDPD3-202ENST00000406256 NSUN7Q8NE18 718 aaKnown RBP18.28■□□□□ 0.52
GDPD3-202ENST00000406256 IWS1Q96ST2 819 aa18.28■□□□□ 0.52
GDPD3-202ENST00000406256 LIMCH1Q9UPQ0 1083 aa18.28■□□□□ 0.52
GDPD3-202ENST00000406256 GNEQ9Y223 722 aaKnown RBP18.28■□□□□ 0.52
GDPD3-202ENST00000406256 STK36Q9NRP7 1315 aa18.27■□□□□ 0.52
GDPD3-202ENST00000406256 CTAGE5O15320 804 aa18.27■□□□□ 0.51
GDPD3-202ENST00000406256 NPY5RQ15761 445 aa18.27■□□□□ 0.51
GDPD3-202ENST00000406256 ZMYND12Q9H0C1 365 aa18.27■□□□□ 0.51
GDPD3-202ENST00000406256 SMCO2A6NFE2 343 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 CPLX1O14810 134 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 ARIH2O95376 493 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 DEXIO95424 95 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 TFRCP02786 760 aaKnown RBP18.26■□□□□ 0.51
GDPD3-202ENST00000406256 SMPD1P17405 629 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 MRPS9P82933 396 aaKnown RBP18.26■□□□□ 0.51
GDPD3-202ENST00000406256 PDE4DQ08499 809 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 SSRP1Q08945 709 aaKnown RBP18.26■□□□□ 0.51
GDPD3-202ENST00000406256 GJC2Q5T442 439 aaPredicted RBP18.26■□□□□ 0.51
GDPD3-202ENST00000406256 ARHGEF16Q5VV41 709 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 VSIG10LQ86VR7 867 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 ANKLE1Q8NAG6 615 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 CUL5Q93034 780 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 VPS54Q9P1Q0 977 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 FAM184BQ9ULE4 1060 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 SYNRGQ9UMZ2 1314 aa18.26■□□□□ 0.51
GDPD3-202ENST00000406256 MYADML2A6NDP7 307 aa18.25■□□□□ 0.51
GDPD3-202ENST00000406256 JAK2O60674 1132 aa18.25■□□□□ 0.51
GDPD3-202ENST00000406256 DUSP11O75319 330 aaKnown RBP18.25■□□□□ 0.51
GDPD3-202ENST00000406256 COL6A1P12109 1028 aa18.25■□□□□ 0.51
GDPD3-202ENST00000406256 CAPN2P17655 700 aa18.25■□□□□ 0.51
GDPD3-202ENST00000406256 NKX3-2P78367 333 aa18.25■□□□□ 0.51
GDPD3-202ENST00000406256 CCSAPQ6IQ19 270 aaPredicted RBP18.25■□□□□ 0.51
GDPD3-202ENST00000406256 CCDC62Q6P9F0 684 aa18.25■□□□□ 0.51
GDPD3-202ENST00000406256 SMARCC2Q8TAQ2 1214 aa18.25■□□□□ 0.51
GDPD3-202ENST00000406256 ZFP91Q96JP5 570 aaPredicted RBP18.25■□□□□ 0.51
GDPD3-202ENST00000406256 UPF3AQ9H1J1 476 aaKnown RBP18.25■□□□□ 0.51
GDPD3-202ENST00000406256 TMEM260Q9NX78 707 aa18.25■□□□□ 0.51
GDPD3-202ENST00000406256 FARP2O94887 1054 aaPredicted RBP18.24■□□□□ 0.51
GDPD3-202ENST00000406256 PGK1P00558 417 aa18.24■□□□□ 0.51
GDPD3-202ENST00000406256 RARBP10826 455 aa18.24■□□□□ 0.51
GDPD3-202ENST00000406256 ADCY7P51828 1080 aa18.24■□□□□ 0.51
GDPD3-202ENST00000406256 LRRC41Q15345 812 aa18.24■□□□□ 0.51
GDPD3-202ENST00000406256 STXBP2Q15833 593 aa18.24■□□□□ 0.51
GDPD3-202ENST00000406256 TEX2Q8IWB9 1127 aa18.24■□□□□ 0.51
GDPD3-202ENST00000406256 TRIM22Q8IYM9 498 aa18.24■□□□□ 0.51
GDPD3-202ENST00000406256 KLHDC9Q8NEP7 349 aa18.24■□□□□ 0.51
GDPD3-202ENST00000406256 PGBD1Q96JS3 809 aa18.24■□□□□ 0.51
GDPD3-202ENST00000406256 PCDHA6Q9UN73 950 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms