RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 NAP1L1P55209 391 aaKnown RBP16.7■□□□□ 0.26
ATG4B-206ENST00000405546 CYP27A1Q02318 531 aa16.7■□□□□ 0.26
ATG4B-206ENST00000405546 REXO1Q8N1G1 1221 aaKnown RBP16.7■□□□□ 0.26
ATG4B-206ENST00000405546 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-206ENST00000405546 GJA10Q969M2 543 aa16.7■□□□□ 0.26
ATG4B-206ENST00000405546 SELENOOQ9BVL4 669 aa16.7■□□□□ 0.26
ATG4B-206ENST00000405546 MMRN2Q9H8L6 949 aa16.7■□□□□ 0.26
ATG4B-206ENST00000405546 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-206ENST00000405546 SCNN1DP51172 638 aa16.7■□□□□ 0.26
ATG4B-206ENST00000405546 STK4Q13043 487 aa16.7■□□□□ 0.26
ATG4B-206ENST00000405546 LIMA1Q9UHB6 759 aaKnown RBP16.7■□□□□ 0.26
ATG4B-206ENST00000405546 PRPF6O94906 941 aaKnown RBP16.69■□□□□ 0.26
ATG4B-206ENST00000405546 ARHGAP25P42331 645 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 ACTN3Q08043 901 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-206ENST00000405546 SLC35G1Q2M3R5 365 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 NAALADL2Q58DX5 795 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 NEK8Q86SG6 692 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 ADSSL1Q8N142 457 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 MB21D1Q8N884 522 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 MED4Q9NPJ6 270 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 TBC1D7Q9P0N9 293 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 LRWD1Q9UFC0 647 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 GOLGA6BA6NDN3 693 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 TOM1O60784 492 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 SLC16A2P36021 539 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 FAM207AQ9NSI2 230 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-206ENST00000405546 AGPAT5Q9NUQ2 364 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 SLURP2P0DP57 97 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 LRRC41Q15345 812 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 C4orf32Q8N8J7 132 aa16.69■□□□□ 0.26
ATG4B-206ENST00000405546 DOT1LQ8TEK3 1739 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 MYH13Q9UKX3 1938 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 NDUFAB1O14561 156 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 BACH1O14867 736 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 NDUFA10O95299 355 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 KRT25Q7Z3Z0 450 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 CAPS2Q9BXY5 557 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 PDE2AO00408 941 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-206ENST00000405546 SCP2P22307 547 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 RBM5P52756 815 aaKnown RBP eCLIP16.68■□□□□ 0.262e-12■■■□□ 18.6
ATG4B-206ENST00000405546 DPP8Q6V1X1 898 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-206ENST00000405546 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-206ENST00000405546 ARL8AQ96BM9 186 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 CCDC51Q96ER9 411 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 CNTNAP4Q9C0A0 1308 aa16.68■□□□□ 0.26
ATG4B-206ENST00000405546 AGPSO00116 658 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 USP14P54578 494 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 AMPD3Q01432 767 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 IKQ13123 557 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-206ENST00000405546 DOK7Q18PE1 504 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 WHAMMP3Q1A5X7 153 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 ANKRD40Q6AI12 368 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 COG1Q8WTW3 980 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 CNOT6LQ96LI5 555 aaKnown RBP16.67■□□□□ 0.26
ATG4B-206ENST00000405546 MXD3Q9BW11 206 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 SUFUQ9UMX1 484 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 SHTN1A0MZ66 631 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 POTEMA6NI47 508 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 CALCRLQ16602 461 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 UBE2SQ16763 222 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 SV2BQ7L1I2 683 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 SH3GLB2Q9NR46 395 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 MYH6P13533 1939 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 RPS6KA5O75582 802 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 PBX1P40424 430 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 PSEN1P49768 467 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 APBA1Q02410 837 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 CHD4Q14839 1912 aa16.67■□□□□ 0.26
ATG4B-206ENST00000405546 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-206ENST00000405546 SERPINB2P05120 415 aa16.66■□□□□ 0.26
ATG4B-206ENST00000405546 RNASE9P60153 205 aaKnown RBP16.66■□□□□ 0.26
ATG4B-206ENST00000405546 TMEM266Q2M3C6 531 aa16.66■□□□□ 0.26
ATG4B-206ENST00000405546 PRR5LQ6MZQ0 368 aa16.66■□□□□ 0.26
ATG4B-206ENST00000405546 IRF2BP1Q8IU81 584 aa16.66■□□□□ 0.26
ATG4B-206ENST00000405546 CICQ96RK0 1608 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-206ENST00000405546 TDP2O95551 362 aa16.66■□□□□ 0.26
ATG4B-206ENST00000405546 TCP10Q12799 353 aa16.66■□□□□ 0.26
ATG4B-206ENST00000405546 CEP57Q86XR8 500 aa16.66■□□□□ 0.26
ATG4B-206ENST00000405546 JAKMIP2Q96AA8 810 aa16.66■□□□□ 0.26
ATG4B-206ENST00000405546 SAR1BQ9Y6B6 198 aa16.66■□□□□ 0.26
ATG4B-206ENST00000405546 SNX29Q8TEQ0 813 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 P2RX5Q93086 422 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 CCDC42Q96M95 316 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 DMGDHQ9UI17 866 aaKnown RBP16.65■□□□□ 0.26
ATG4B-206ENST00000405546 REXO2Q9Y3B8 237 aaKnown RBP16.65■□□□□ 0.26
ATG4B-206ENST00000405546 ANKRD36CQ5JPF3 1778 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 DNM2P50570 870 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 TRIM14Q14142 442 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 SPA17Q15506 151 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 KCTD1Q719H9 257 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 ANKRD13CQ8N6S4 541 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 RTFDC1Q9BY42 306 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-206ENST00000405546 TRIM9Q9C026 710 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
ATG4B-206ENST00000405546 FLT1P17948 1338 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 COL14A1Q05707 1796 aaKnown RBP16.65■□□□□ 0.26
ATG4B-206ENST00000405546 LGALS16A8MUM7 142 aa16.65■□□□□ 0.26
ATG4B-206ENST00000405546 CACNB1Q02641 598 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-206ENST00000405546 OTUD6BQ8N6M0 293 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms