RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 ACAD9Q9H845 621 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 HOMER2Q9NSB8 354 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 FEM1BQ9UK73 627 aa11.12□□□□□ -0.63
NUP43-204ENST00000403890 TECTAO75443 2155 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 NAV1Q8NEY1 1877 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 CYP2D7A0A087X1C5 515 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 PRKAB2O43741 272 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 MYL3P08590 195 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 DEFB103AP81534 67 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 PTPROQ16827 1216 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 LRRFIP1Q32MZ4 808 aaKnown RBP11.11□□□□□ -0.63
NUP43-204ENST00000403890 DUSP28Q4G0W2 176 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 HERC4Q5GLZ8 1057 aaPredicted RBP11.11□□□□□ -0.63
NUP43-204ENST00000403890 NFRKBQ6P4R8 1299 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 EP400NLQ6ZTU2 488 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 FBXO16Q8IX29 292 aaPredicted RBP11.11□□□□□ -0.63
NUP43-204ENST00000403890 MRPL38Q96DV4 380 aaKnown RBP11.11□□□□□ -0.63
NUP43-204ENST00000403890 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 MTG1Q9BT17 334 aaPredicted RBP11.11□□□□□ -0.63
NUP43-204ENST00000403890 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
NUP43-204ENST00000403890 ARMT1Q9H993 441 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 A1CFQ9NQ94 594 aaKnown RBP11.11□□□□□ -0.63
NUP43-204ENST00000403890 NYAP2Q9P242 653 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 NOD1Q9Y239 953 aa11.11□□□□□ -0.63
NUP43-204ENST00000403890 COL4A4P53420 1690 aaPredicted RBP11.11□□□□□ -0.63
NUP43-204ENST00000403890 TCRBV5S4A2TA0A5A2 114 aa11.1□□□□□ -0.63
NUP43-204ENST00000403890 BCAR3O75815 825 aa11.1□□□□□ -0.63
NUP43-204ENST00000403890 FDX1P10109 184 aa11.1□□□□□ -0.63
NUP43-204ENST00000403890 CPT1AP50416 773 aa11.1□□□□□ -0.63
NUP43-204ENST00000403890 ATP8B2P98198 1209 aa11.1□□□□□ -0.63
NUP43-204ENST00000403890 TCF15Q12870 199 aa11.1□□□□□ -0.63
NUP43-204ENST00000403890 EDAQ92838 391 aa11.1□□□□□ -0.63
NUP43-204ENST00000403890 PABPC5Q96DU9 382 aaKnown RBP11.1□□□□□ -0.63
NUP43-204ENST00000403890 DDRGK1Q96HY6 314 aa11.1□□□□□ -0.63
NUP43-204ENST00000403890 VTA1Q9NP79 307 aa11.1□□□□□ -0.63
NUP43-204ENST00000403890 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
NUP43-204ENST00000403890 NOP58Q9Y2X3 529 aaKnown RBP11.1□□□□□ -0.63
NUP43-204ENST00000403890 DDX49Q9Y6V7 483 aaKnown RBP11.1□□□□□ -0.63
NUP43-204ENST00000403890 ABHD14A-ACY1A0A1B0GW23 586 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 KPNA6O60684 536 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 PARNO95453 639 aaKnown RBP11.09□□□□□ -0.63
NUP43-204ENST00000403890 PTPN11Q06124 597 aaPredicted RBP11.09□□□□□ -0.63
NUP43-204ENST00000403890 COL19A1Q14993 1142 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 TIGD5Q53EQ6 642 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 BRDTQ58F21 947 aaPredicted RBP11.09□□□□□ -0.63
NUP43-204ENST00000403890 CNKSR3Q6P9H4 555 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 CCDC155Q8N6L0 562 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 BANK1Q8NDB2 785 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 AFAP1L1Q8TED9 768 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 PBXIP1Q96AQ6 731 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 POP1Q99575 1024 aaKnown RBP11.09□□□□□ -0.63
NUP43-204ENST00000403890 SLC4A5Q9BY07 1137 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 WDR11Q9BZH6 1224 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 RNF146Q9NTX7 359 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 CLIP2Q9UDT6 1046 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 MYH8P13535 1937 aa11.09□□□□□ -0.63
NUP43-204ENST00000403890 IPO8O15397 1037 aaKnown RBP11.08□□□□□ -0.64
NUP43-204ENST00000403890 EFCAB14O75071 495 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 SELPP16109 830 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 GPNMBQ14956 572 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 TKFCQ3LXA3 575 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 FAM117BQ6P1L5 589 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 RNF135Q8IUD6 432 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 SUGP1Q8IWZ8 645 aaKnown RBP11.08□□□□□ -0.64
NUP43-204ENST00000403890 TRMT2AQ8IZ69 625 aaKnown RBP11.08□□□□□ -0.64
NUP43-204ENST00000403890 CAGE1Q8TC20 777 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 OXER1Q8TDS5 423 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 MORC4Q8TE76 937 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 PPP1R13LQ8WUF5 828 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 TRERF1Q96PN7 1200 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 C17orf80Q9BSJ5 609 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 IRF2BPLQ9H1B7 796 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 INSL6Q9Y581 213 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 MYO7AQ13402 2215 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 FAM186AA6NE01 2351 aa11.08□□□□□ -0.64
NUP43-204ENST00000403890 TMEM221A6NGB7 291 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 M0R296 226 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 ANP32CO43423 234 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 NCK2O43639 380 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 MBD4O95243 580 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 CXCL10P02778 98 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 RARSP54136 660 aaKnown RBP11.07□□□□□ -0.64
NUP43-204ENST00000403890 IKBKEQ14164 716 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 SMAD2Q15796 467 aaKnown RBP11.07□□□□□ -0.64
NUP43-204ENST00000403890 PTGISQ16647 500 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 TCEAL5Q5H9L2 206 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 CTR9Q6PD62 1173 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 TRIM67Q6ZTA4 783 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 LRRC8DQ7L1W4 858 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 ERMP1Q7Z2K6 904 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 AACSQ86V21 672 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 RPAP2Q8IXW5 612 aaPredicted RBP11.07□□□□□ -0.64
NUP43-204ENST00000403890 OR6J1Q8NGC5 347 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 FAM86C1Q9NVL1 165 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 CLDND1Q9NY35 253 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 CYP39A1Q9NYL5 469 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 RAD50Q92878 1312 aa11.07□□□□□ -0.64
NUP43-204ENST00000403890 RBM47A0AV96 593 aaKnown RBP11.06□□□□□ -0.64
NUP43-204ENST00000403890 GOLIM4O00461 696 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms