RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 DPF3Q92784 378 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 HHIPL1Q96JK4 782 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 JMJD8Q96S16 334 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 MMP19Q99542 508 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 G6PC3Q9BUM1 346 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 JAM3Q9BX67 310 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 INTS7Q9NVH2 962 aaKnown RBP5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 DDX56Q9NY93 547 aaKnown RBP5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 SAMD15Q9P1V8 674 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 KLHL42Q9P2K6 505 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 MAPRE3Q9UPY8 281 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 M0R2C6 588 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 ARVCFO00192 962 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 KCNK3O14649 394 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 SOD2P04179 222 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 CKMP06732 381 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 PYGMP11217 842 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 ITGB7P26010 798 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 SSTR4P31391 388 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 ZP2Q05996 745 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 TEX2Q8IWB9 1127 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 PPM1KQ8N3J5 372 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 FCRL2Q96LA5 508 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 FBLN5Q9UBX5 448 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 RWDD3Q9Y3V2 267 aa5.43□□□□□ -1.54
HMGB1P17-201ENST00000403495 CCDC66A2RUB6 948 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 TBC1D8O95759 1140 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 EFEMP2O95967 443 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 TACR1P25103 407 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 GALK1P51570 392 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 HK2P52789 917 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 PAK1Q13153 545 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 TESK1Q15569 626 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 PLEKHG6Q3KR16 790 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 RSPO2Q6UXX9 243 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 DDX46Q7L014 1031 aaKnown RBP5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 WNK4Q96J92 1243 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 MAP6Q96JE9 813 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 ALG1Q9BT22 464 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 CLDND1Q9NY35 253 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 MARCH2Q9P0N8 246 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 VAV3Q9UKW4 847 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 CBLCQ9ULV8 474 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 ZNF281Q9Y2X9 895 aa5.42□□□□□ -1.54
HMGB1P17-201ENST00000403495 TRAF5O00463 557 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 EYA4O95677 639 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 FUCA1P04066 466 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 ZGLP1P0C6A0 271 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 MSL3P1P0C860 447 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 COL6A2P12110 1019 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 GRK2P25098 689 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 GRK3P35626 688 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 ERVFC1P60507 584 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 RPL11P62913 178 aaKnown RBP5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 KIZQ2M2Z5 673 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 IQCEQ6IPM2 695 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 CYP2R1Q6VVX0 501 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 UBE2R2Q712K3 238 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 CEP68Q76N32 757 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 ZFYVE21Q9BQ24 234 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 CDIP1Q9H305 208 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 HOMER2Q9NSB8 354 aa5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 G3BP2Q9UN86 482 aaKnown RBP5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 TIMM13Q9Y5L4 95 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P17-201ENST00000403495 TRBV23OR9-2A0A075B6M9 112 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 WTIPA6NIX2 430 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 FADS2P1A8MWK0 482 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 NEMP1O14524 444 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 MYO1BO43795 1136 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 NPHS1O60500 1241 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 KATNA1O75449 491 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 KRT37O76014 449 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 KRT15P19012 456 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 POU3F2P20265 443 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 TRHRP34981 398 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 FLT3P36888 993 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 LSAMPQ13449 338 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 TMEM177Q53S58 311 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 BRDTQ58F21 947 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 HLA-DQA1Q5Y7H0 255 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 FSTL4Q6MZW2 842 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 NFXL1Q6ZNB6 911 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 CEP128Q6ZU80 1094 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 DDX53Q86TM3 631 aaKnown RBP5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 SLCO6A1Q86UG4 719 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 FERMT3Q86UX7 667 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 AHI1Q8N157 1196 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 PI4K2BQ8TCG2 481 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 COG1Q8WTW3 980 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 GPR101Q96P66 508 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 ALPK1Q96QP1 1244 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 PLCD4Q9BRC7 762 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 CATSPERZQ9NTU4 200 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 BSDC1Q9NW68 430 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 H2AFY2Q9P0M6 372 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 IMPACTQ9P2X3 320 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 SLC5A6Q9Y289 635 aa5.4□□□□□ -1.54
HMGB1P17-201ENST00000403495 CBX4O00257 560 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms