RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ANKS1AQ92625 1134 aa14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 FTOQ9C0B1 505 aaKnown RBP eCLIP14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 RANBP17Q9H2T7 1088 aaKnown RBP14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 ECHDC1Q9NTX5 307 aa14.13□□□□□ -0.15
SPTLC1P3-201ENST00000403408 MYO15AQ9UKN7 3530 aa14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 ACTN1P12814 892 aa14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 IL9P15248 144 aa14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 EDNRBP24530 442 aa14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 GDF6Q6KF10 455 aaPredicted RBP14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 NFRKBQ6P4R8 1299 aa14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 TRAF7Q6Q0C0 670 aa14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 FAM178BQ8IXR5 827 aa14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 UBE2ZQ9H832 354 aaPredicted RBP14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 MTUS1Q9ULD2 1270 aa14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 MTMR7Q9Y216 660 aa14.12□□□□□ -0.15
SPTLC1P3-201ENST00000403408 CACNA1HO95180 2353 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 SIP14410 1827 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 WDR87Q6ZQQ6 2873 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 NBNO60934 754 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 APPP05067 770 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 CPT1AP50416 773 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 PPARAQ07869 468 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 KAT2BQ92831 832 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 WNT8BQ93098 351 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 LRRCC1Q9C099 1032 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 SPTBN4Q9H254 2564 aa14.11□□□□□ -0.15
SPTLC1P3-201ENST00000403408 ZDBF2Q9HCK1 2354 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 LINC01553A4QN01 128 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 ABCB7O75027 752 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 BAIAP3O94812 1187 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 ERVK-21P61565 698 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 MBTPS1Q14703 1052 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 BTNL9Q6UXG8 535 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 RETREG2Q8NC44 543 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 LMCD1Q9NZU5 365 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 STX8Q9UNK0 236 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 TECTAO75443 2155 aa14.1□□□□□ -0.15
SPTLC1P3-201ENST00000403408 KIF28PB7ZC32 967 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 CXCL10P02778 98 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 GNAT2P19087 354 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 CALML3P27482 149 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 HNRNPUQ00839 825 aaKnown RBP eCLIP14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 PTPN11Q06124 597 aaPredicted RBP14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 MKRN4PQ13434 485 aaPredicted RBP14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 HIC1Q14526 733 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 PTGISQ16647 500 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 LEXMQ3ZCV2 418 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 C20orf194Q5TEA3 1177 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 CCDC62Q6P9F0 684 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 GJD3Q8N144 294 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 ZNF287Q9HBT7 754 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 DDX19BQ9UMR2 479 aa14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 FRMPD2Q68DX3 1309 aaPredicted RBP14.09□□□□□ -0.15
SPTLC1P3-201ENST00000403408 MICAL3Q7RTP6 2002 aa14.08□□□□□ -0.15
SPTLC1P3-201ENST00000403408 ZFHX2Q9C0A1 2572 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 ATG2AQ2TAZ0 1938 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 PTPDC1A2A3K4 754 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 PRR33A8MZF0 331 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 GJB5O95377 273 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 KCNA5P22460 613 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 CHMP4BP1P59074 171 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 RPS6P62753 249 aaKnown RBP14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 PDE4BQ07343 736 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 BFSP2Q13515 415 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 PPP2R5BQ15173 497 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 TRIM71Q2Q1W2 868 aaKnown RBP14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 SYDE2Q5VT97 1194 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 OTUD7AQ8TE49 926 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 AFG1LQ8WV93 481 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 TBC1D5Q92609 795 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 C17orf80Q9BSJ5 609 aa14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 GPHNQ9NQX3 736 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1P3-201ENST00000403408 GRXCR2A6NFK2 248 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 ZFYP08048 801 aaPredicted RBP14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 TXNP10599 105 aaKnown RBP14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 SELPP16109 830 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 MRE11P49959 708 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 ARHGAP1Q07960 439 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 RBL2Q08999 1139 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 CCDC96Q2M329 555 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 ZMYM1Q5SVZ6 1142 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 VPS53Q5VIR6 699 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 FAM117BQ6P1L5 589 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 LRRC8DQ7L1W4 858 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 AFAP1L1Q8TED9 768 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 DCAF4Q8WV16 495 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 TGS1Q96RS0 853 aaKnown RBP14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 RAD9AQ99638 391 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 OSBPL7Q9BZF2 842 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 GPCPD1Q9NPB8 672 aa14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 ADD3Q9UEY8 706 aaKnown RBP14.07□□□□□ -0.16
SPTLC1P3-201ENST00000403408 LOC102724159A0A0B4J2E5 919 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 POTEB3A0JP26 581 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 TSPY2A6NKD2 308 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 MMP3P08254 477 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 CKBP12277 381 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 KCNJ6P48051 423 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 ZNF200P98182 395 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms