RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 HDAC9Q9UKV0 1011 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 SLC37A4O43826 429 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 MARCH6O60337 910 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TDP2O95551 362 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CASP14P31944 242 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 UBXN1Q04323 297 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TSR1Q2NL82 804 aaKnown RBP19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CENPPQ6IPU0 288 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 ZNF507Q8TCN5 953 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 PNMA5Q96PV4 448 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 VPS16Q9H269 839 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 BLOC1S4Q9NUP1 217 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 SIPA1L1O43166 1804 aa19.81■□□□□ 0.76
HLA-DQB1-204ENST00000399084 SCN9AQ15858 1988 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CCT6AP40227 531 aaKnown RBP19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TUBB4BP68371 445 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 LRRC63Q05C16 580 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CDC37Q16543 378 aaPredicted RBP19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 AOC3Q16853 763 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 GLIPR1L2Q4G1C9 344 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CLEC10AQ8IUN9 316 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 SIAH1Q8IUQ4 282 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 SNX29Q8TEQ0 813 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CAMKK2Q96RR4 588 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TAB2Q9NYJ8 693 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 MYO1AQ9UBC5 1043 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 ADGRG1Q9Y653 693 aa19.8■□□□□ 0.76
HLA-DQB1-204ENST00000399084 PPIP5K2O43314 1243 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 SLC16A2P36021 539 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 FIGNQ5HY92 759 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 OR8K1Q8NGG5 319 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 LRRC15Q8TF66 581 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 PLIN2Q99541 437 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 NUP88Q99567 741 aaPredicted RBP19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 FEZ1Q99689 392 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CCDC94Q9BW85 323 aaPredicted RBP19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 ABHD10Q9NUJ1 306 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 ZNF215Q9UL58 517 aaPredicted RBP19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 MAPK8IP1Q9UQF2 711 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 ADAMTSL1Q8N6G6 1762 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 PSME4Q14997 1843 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 KIF20AO95235 890 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 BMP3P12645 472 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CHRNA5P30532 468 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CASQ1P31415 396 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 FBXO11Q86XK2 927 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TTLL6Q8N841 843 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 HAS1Q92839 578 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 DUSP9Q99956 384 aaKnown RBP19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 KCNMB3Q9NPA1 279 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CAPN11Q9UMQ6 739 aa19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 LUC7L2Q9Y383 392 aaKnown RBP19.79■□□□□ 0.76
HLA-DQB1-204ENST00000399084 VIL1P09327 827 aaKnown RBP19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 GOLGA8FQ08AF8 430 aa19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 GOLGA8DPQ0D2H9 430 aa19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 STK4Q13043 487 aa19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 SYDE2Q5VT97 1194 aa19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 RSBN1LQ6PCB5 846 aaPredicted RBP19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 FAM151AQ8WW52 585 aa19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TUBGCP2Q9BSJ2 902 aa19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 ANO3Q9BYT9 981 aa19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TDRD3Q9H7E2 651 aaKnown RBP19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 ARHGEF10LQ9HCE6 1279 aa19.78■□□□□ 0.76
HLA-DQB1-204ENST00000399084 MYMKA6NI61 221 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TBC1D12O60347 775 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 KRT9P35527 623 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 FXR1P51114 621 aaKnown RBP eCLIP19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 EHHADHQ08426 723 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 UBE2SQ16763 222 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 Q4G0T1 1027 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 ARHGAP27Q6ZUM4 889 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TOGARAM2Q6ZUX3 1019 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 OGFOD1Q8N543 542 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 SLC16A10Q8TF71 515 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CPLX3Q8WVH0 158 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CRYGNQ8WXF5 182 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 PRMT6Q96LA8 375 aaPredicted RBP19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 FAM20AQ96MK3 541 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 DNAJC7Q99615 494 aa19.77■□□□□ 0.76
HLA-DQB1-204ENST00000399084 PIK3CDO00329 1044 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 KIF5CO60282 957 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 PLA2G6O60733 806 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 NDUFB10O96000 172 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CIITAP33076 1130 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 PMS1P54277 932 aaKnown RBP19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CACNB3P54284 484 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 GNG11P61952 73 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 HAUS3Q68CZ6 603 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ANKRD40Q6AI12 368 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 MTMR14Q8NCE2 650 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ERMNQ8TAM6 284 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 TSC1Q92574 1164 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 ERGIC2Q96RQ1 377 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 CSRNP1Q96S65 589 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 A0A1W2PQJ5 194 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 TRIM49BA6NDI0 452 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 SPDYE2BA6NHP3 402 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 MEIS2O14770 477 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 SPDYE6P0CI01 402 aa19.76■□□□□ 0.75
HLA-DQB1-204ENST00000399084 MCM6Q14566 821 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms