RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 HSCBQ8IWL3 235 aa14.26□□□□□ -0.13
HLA-DQB1-203ENST00000399082 RASGRP4Q8TDF6 673 aa14.26□□□□□ -0.13
HLA-DQB1-203ENST00000399082 MORC4Q8TE76 937 aa14.26□□□□□ -0.13
HLA-DQB1-203ENST00000399082 SH3TC2Q8TF17 1288 aa14.26□□□□□ -0.13
HLA-DQB1-203ENST00000399082 CUL5Q93034 780 aa14.26□□□□□ -0.13
HLA-DQB1-203ENST00000399082 KATNBL1Q9H079 304 aa14.26□□□□□ -0.13
HLA-DQB1-203ENST00000399082 MAP3K20Q9NYL2 800 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB1-203ENST00000399082 CENPFP49454 3210 aa14.26□□□□□ -0.13
HLA-DQB1-203ENST00000399082 EIF2AK2P19525 551 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 GJB2P29033 226 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 GRK4P32298 578 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 CYP2C19P33261 490 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PKN2Q16513 984 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 MAP3K21Q5TCX8 1036 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 FAM177A1Q8N128 213 aaPredicted RBP14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 DAGLBQ8NCG7 672 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 SLAIN1Q8ND83 568 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 TRPV1Q8NER1 839 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 CCDC148Q8NFR7 591 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 OXER1Q8TDS5 423 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 WASF1Q92558 559 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PGBD1Q96JS3 809 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 TINF2Q9BSI4 451 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PXMP2Q9NR77 195 aa14.25□□□□□ -0.13
HLA-DQB1-203ENST00000399082 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 EDIL3O43854 480 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 HMGCRP04035 888 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 INHAP05111 366 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 MRPL12P52815 198 aaKnown RBP14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 NLRP5P59047 1200 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 UBXN2AP68543 259 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 KRT40Q6A162 431 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ARMCX2Q7L311 632 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 DNERQ8NFT8 737 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 CCDC12Q8WUD4 166 aaPredicted RBP14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 TNFRSF25Q93038 417 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 INTS4Q96HW7 963 aaKnown RBP14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 RMDN3Q96TC7 470 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PDCD2LQ9BRP1 358 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 C6orf50Q9HD87 102 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 SLC5A4Q9NY91 659 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 BIN2Q9UBW5 565 aaPredicted RBP14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PCDHA6Q9UN73 950 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PCDHA4Q9UN74 947 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PCDHA8Q9Y5H6 950 aa14.24□□□□□ -0.13
HLA-DQB1-203ENST00000399082 MYH7BA7E2Y1 1941 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 MMP1P03956 469 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 CYBAP13498 195 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 GUCY1B3Q02153 619 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 CACNB2Q08289 660 aaPredicted RBP14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PGM5Q15124 567 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 EARS2Q5JPH6 523 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PRAMEF19Q5SWL8 479 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 JAKMIP3Q5VZ66 844 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 TEX2Q8IWB9 1127 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 TRMT44Q8IYL2 757 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 BLIDQ8IZY5 108 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 REXO1Q8N1G1 1221 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 MSL3Q8N5Y2 521 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 CRYGNQ8WXF5 182 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ARMC5Q96C12 935 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ANO3Q9BYT9 981 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 SMC3Q9UQE7 1217 aa14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.23□□□□□ -0.13
HLA-DQB1-203ENST00000399082 LOC102724159A0A0B4J2E5 919 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 FAM205CA6NFA0 338 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 RGS20O76081 388 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ZNF865P0CJ78 1059 aaPredicted RBP14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 GNA11P29992 359 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 MRPS9P82933 396 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 NR5A1Q13285 461 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 AP3B2Q13367 1082 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 PWP2Q15269 919 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 SLC9C1Q4G0N8 1177 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ARHGEF16Q5VV41 709 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 FAM184AQ8NB25 1140 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 FBXO18Q8NFZ0 1043 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 NSUN6Q8TEA1 469 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ZNF333Q96JL9 665 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ZFP91Q96JP5 570 aaPredicted RBP14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 C8orf76Q96K31 380 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 GLT8D2Q9H1C3 349 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 TSHZ2Q9NRE2 1034 aa14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ADD3Q9UEY8 706 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-203ENST00000399082 KIAA1217Q5T5P2 1943 aa14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 FRMPD3Q5JV73 1810 aa14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ASB14A6NK59 587 aa14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 ADCY6O43306 1168 aa14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 NR3C2P08235 984 aa14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 CCND3P30281 292 aaPredicted RBP14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 SREBF1P36956 1147 aa14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 MTFR1Q15390 333 aa14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 GALNT17Q6IS24 598 aa14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 TAPT1Q6NXT6 567 aa14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 VSIG10LQ86VR7 867 aa14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 FBXO16Q8IX29 292 aaPredicted RBP14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 DIS3L2Q8IYB7 885 aaKnown RBP14.21□□□□□ -0.13
HLA-DQB1-203ENST00000399082 SPDYE3A6NKU9 549 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms