RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 CERKLQ49MI3 558 aaPredicted RBP15.47■□□□□ 0.07
PRAME-202ENST00000398743 DACT2Q5SW24 774 aa15.47■□□□□ 0.07
PRAME-202ENST00000398743 MSL1Q68DK7 614 aa15.47■□□□□ 0.07
PRAME-202ENST00000398743 DCAF4Q8WV16 495 aa15.47■□□□□ 0.07
PRAME-202ENST00000398743 RAD54LQ92698 747 aa15.47■□□□□ 0.07
PRAME-202ENST00000398743 MKL1Q969V6 931 aa15.47■□□□□ 0.07
PRAME-202ENST00000398743 DNAJC7Q99615 494 aa15.47■□□□□ 0.07
PRAME-202ENST00000398743 NAP1L4Q99733 375 aaKnown RBP15.47■□□□□ 0.07
PRAME-202ENST00000398743 TRIM34Q9BYJ4 488 aa15.47■□□□□ 0.07
PRAME-202ENST00000398743 KANSL2Q9H9L4 492 aa15.47■□□□□ 0.07
PRAME-202ENST00000398743 SLC39A2Q9NP94 309 aa15.47■□□□□ 0.07
PRAME-202ENST00000398743 ARGLU1Q9NWB6 273 aaPredicted RBP15.47■□□□□ 0.07
PRAME-202ENST00000398743 DDTLA6NHG4 134 aaPredicted RBP15.46■□□□□ 0.07
PRAME-202ENST00000398743 RAD21O60216 631 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 ECE2O60344 883 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 EEF2P13639 858 aaKnown RBP15.46■□□□□ 0.07
PRAME-202ENST00000398743 MTIF2P46199 727 aaKnown RBP15.46■□□□□ 0.07
PRAME-202ENST00000398743 TSR1Q2NL82 804 aaKnown RBP15.46■□□□□ 0.07
PRAME-202ENST00000398743 ZSCAN29Q8IWY8 852 aaPredicted RBP15.46■□□□□ 0.07
PRAME-202ENST00000398743 HPS3Q969F9 1004 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 EEF2KMTQ96G04 330 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 NUP58Q9BVL2 599 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 NYAP2Q9P242 653 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 PCDHAC2Q9Y5I4 1007 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 FAM196BA6NMK8 535 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 H0YIN7 160 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 MARCH6O60337 910 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 TMEM119Q4V9L6 283 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 ZNF569Q5MCW4 686 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 CENPPQ6IPU0 288 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
PRAME-202ENST00000398743 DYMQ7RTS9 669 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 FAM198AQ9UFP1 575 aa15.46■□□□□ 0.07
PRAME-202ENST00000398743 TRIM21P19474 475 aaKnown RBP15.45■□□□□ 0.06
PRAME-202ENST00000398743 HOXA7P31268 230 aaPredicted RBP15.45■□□□□ 0.06
PRAME-202ENST00000398743 CLCN6P51797 869 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 TBC1D8BQ0IIM8 1120 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 QRICH1Q2TAL8 776 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 SLFN13Q68D06 897 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 STYK1Q6J9G0 422 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 RETREG2Q8NC44 543 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 HAS1Q92839 578 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 CHP1Q99653 195 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 NUDT12Q9BQG2 462 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 SLF1Q9BQI6 1058 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 NOC4LQ9BVI4 516 aaKnown RBP15.45■□□□□ 0.06
PRAME-202ENST00000398743 SEMA6BQ9H3T3 888 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 MYO1AQ9UBC5 1043 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 SERPINA10Q9UK55 444 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 ATF5Q9Y2D1 282 aaPredicted RBP15.45■□□□□ 0.06
PRAME-202ENST00000398743 EPN1Q9Y6I3 576 aaPredicted RBP15.45■□□□□ 0.06
PRAME-202ENST00000398743 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
PRAME-202ENST00000398743 NDUFA10O95299 355 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 TATDN1Q6P1N9 297 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 GUF1Q8N442 669 aaKnown RBP15.45■□□□□ 0.06
PRAME-202ENST00000398743 DDX12PQ92771 950 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 TTYH3Q9C0H2 523 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 ZNF446Q9NWS9 450 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 PCDHA12Q9UN75 941 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 PCDHA1Q9Y5I3 950 aa15.45■□□□□ 0.06
PRAME-202ENST00000398743 MYH4Q9Y623 1939 aa15.44■□□□□ 0.06
PRAME-202ENST00000398743 CTAGE9A4FU28 777 aa15.44■□□□□ 0.06
PRAME-202ENST00000398743 IDEP14735 1019 aa15.44■□□□□ 0.06
PRAME-202ENST00000398743 ICA1Q05084 483 aa15.44■□□□□ 0.06
PRAME-202ENST00000398743 CDC37Q16543 378 aaPredicted RBP15.44■□□□□ 0.06
PRAME-202ENST00000398743 TMEM179Q6ZVK1 233 aa15.44■□□□□ 0.06
PRAME-202ENST00000398743 SH3BP5LQ7L8J4 393 aa15.44■□□□□ 0.06
PRAME-202ENST00000398743 KDM3AQ9Y4C1 1321 aa15.44■□□□□ 0.06
PRAME-202ENST00000398743 USP17L15C9J2P7 530 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 USP17L13C9JLJ4 530 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 USP17L11C9JVI0 530 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 USP17L18D6R9N7 530 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 USP17L22D6RA61 530 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 USP17L17D6RBQ6 530 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 USP17L19D6RCP7 530 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 USP17L20D6RJB6 530 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 ARHGAP25P42331 645 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 USP17L24Q0WX57 530 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 PSMD2Q13200 908 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 TUBB2AQ13885 445 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 SHROOM1Q2M3G4 852 aaPredicted RBP15.43■□□□□ 0.06
PRAME-202ENST00000398743 MIIPQ5JXC2 388 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 FKBP15Q5T1M5 1219 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 USP17L6PQ6QN14 398 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 RSRC2Q7L4I2 434 aaKnown RBP15.43■□□□□ 0.06
PRAME-202ENST00000398743 KCNK18Q7Z418 384 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 SLC35F6Q8N357 371 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 GPR161Q8N6U8 529 aaKnown RBP15.43■□□□□ 0.06
PRAME-202ENST00000398743 GOLGA1Q92805 767 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 TUBB2BQ9BVA1 445 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 NT5C3AQ9H0P0 336 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 SIPA1L1O43166 1804 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 FGFR1OPO95684 399 aaKnown RBP15.43■□□□□ 0.06
PRAME-202ENST00000398743 LRRC63Q05C16 580 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 SEPT2Q15019 361 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 MEA1Q16626 185 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 KIF4BQ2VIQ3 1234 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 TEX35Q5T0J7 233 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 WDR59Q6PJI9 974 aa15.43■□□□□ 0.06
PRAME-202ENST00000398743 KRT222Q8N1A0 295 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms