RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 SND1Q7KZF4 910 aaKnown RBP eCLIP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 ZSCAN29Q8IWY8 852 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 TRIML1Q8N9V2 468 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 CAPZA3Q96KX2 299 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 GUCA1BQ9UMX6 200 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 HPS5Q9UPZ3 1129 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 GOLGA8BA8MQT2 603 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 ATP1A1P05023 1023 aaKnown RBP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 EPB41P11171 864 aaKnown RBP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 NAP1L1P55209 391 aaKnown RBP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 FILIP1LQ4L180 1135 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 RNF187Q5TA31 235 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 NIM1KQ8IY84 436 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 TEKT1Q969V4 418 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 AIFM3Q96NN9 605 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 TRIM6Q9C030 488 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 CENPHQ9H3R5 247 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 TRIM10Q9UDY6 481 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 CD2APQ9Y5K6 639 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 ITIH6Q6UXX5 1313 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 ECM2O94769 699 aaPredicted RBP11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 BAG3O95817 575 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 IBSPP21815 317 aaPredicted RBP11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 BIRC2Q13490 618 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 TTMPQ5BVD1 217 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 SPECC1Q5M775 1068 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 SPATA1Q5VX52 437 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 PAPD7Q5XG87 772 aaKnown RBP11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 NUP133Q8WUM0 1156 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 JDP2Q8WYK2 163 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 RRP36Q96EU6 259 aaKnown RBP11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 CTAGE1Q96RT6 745 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 SLC40A1Q9NP59 571 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 ABHD10Q9NUJ1 306 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 DDX20Q9UHI6 824 aaKnown RBP11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 SERTAD1Q9UHV2 236 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 QSER1Q2KHR3 1735 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 DDTLA6NHG4 134 aaPredicted RBP11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 TBC1D10BQ4KMP7 808 aaPredicted RBP11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 TMEM67Q5HYA8 995 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 NAA35Q5VZE5 725 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 NFXL1Q6ZNB6 911 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 CCDC13Q8IYE1 715 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 PHKBQ93100 1093 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 ARL8AQ96BM9 186 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 CPVLQ9H3G5 476 aa11.26□□□□□ -0.61
HMGCLL1-205ENST00000398661 MYH8P13535 1937 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 ZNF541Q9H0D2 1346 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 A0A1B0GUA9 196 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 ZEB2O60315 1214 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 RTN2O75298 545 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 CDR1P51861 262 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 CLNS1AP54105 237 aaKnown RBP11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 SARNPP82979 210 aaKnown RBP11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 SNCBQ16143 134 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 GRAMD1CQ8IYS0 662 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 KRI1Q8N9T8 703 aaKnown RBP11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 CAGE1Q8TC20 777 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 ZNF473Q8WTR7 871 aaKnown RBP11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 PSMD1Q99460 953 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 EPN3Q9H201 632 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 ZNRF3Q9ULT6 936 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 RAD21O60216 631 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 GNAT2P19087 354 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 CDKAL1Q5VV42 579 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 MIGA2Q7L4E1 593 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 CEP57Q86XR8 500 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 IGDCC4Q8TDY8 1250 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 ALG1Q9BT22 464 aa11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 REXO2Q9Y3B8 237 aaKnown RBP11.25□□□□□ -0.61
HMGCLL1-205ENST00000398661 PDS5AQ29RF7 1337 aaKnown RBP11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 POLR2DO15514 142 aaKnown RBP11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 ATP1A2P50993 1020 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 STX17P56962 302 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 C2orf54Q08AI8 447 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 C12orf60Q5U649 245 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 ALS2CLQ60I27 953 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 KRT40Q6A162 431 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 CCDC70Q6NSX1 233 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 RSBN1LQ6PCB5 846 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 CCDC84Q86UT8 332 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 JAKMIP2Q96AA8 810 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 RUFY1Q96T51 708 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 HAUS4Q9H6D7 363 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 SYNRGQ9UMZ2 1314 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 CCDC88AQ3V6T2 1871 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 TSPY2A6NKD2 308 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 RNF225M0QZC1 329 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 PDHBP11177 359 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 EZRP15311 586 aaKnown RBP11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 LSP1P33241 339 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 GSTO1P78417 241 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 TFAP4Q01664 338 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 DRP2Q13474 957 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 ALX1Q15699 326 aa11.24□□□□□ -0.61
HMGCLL1-205ENST00000398661 TLDC1Q6P9B6 456 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms