RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 IGDCC4Q8TDY8 1250 aa13.65□□□□□ -0.22
SOCS6-201ENST00000397942 EPB41L5Q9HCM4 733 aa13.65□□□□□ -0.22
SOCS6-201ENST00000397942 RABGAP1Q9Y3P9 1069 aa13.65□□□□□ -0.22
SOCS6-201ENST00000397942 A0A0G2JLW4 131 aa13.65□□□□□ -0.23
SOCS6-201ENST00000397942 TTC26A0AVF1 554 aa13.65□□□□□ -0.23
SOCS6-201ENST00000397942 PFKFB3Q16875 520 aaPredicted RBP13.65□□□□□ -0.23
SOCS6-201ENST00000397942 DHX40Q8IX18 779 aaKnown RBP13.65□□□□□ -0.23
SOCS6-201ENST00000397942 NLGN1Q8N2Q7 840 aa13.65□□□□□ -0.23
SOCS6-201ENST00000397942 KRT12Q99456 494 aa13.65□□□□□ -0.23
SOCS6-201ENST00000397942 FAM184BQ9ULE4 1060 aa13.65□□□□□ -0.23
SOCS6-201ENST00000397942 RGS16O15492 202 aaPredicted RBP13.64□□□□□ -0.23
SOCS6-201ENST00000397942 MIER3Q7Z3K6 550 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 ENGASEQ8NFI3 743 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 MXRA7P84157 204 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 LLGL1Q15334 1064 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 LIN9Q5TKA1 542 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 VSIG1Q86XK7 387 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 GOLGA5Q8TBA6 731 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 NHEJ1Q9H9Q4 299 aaPredicted RBP13.64□□□□□ -0.23
SOCS6-201ENST00000397942 BZW2Q9Y6E2 419 aaKnown RBP13.64□□□□□ -0.23
SOCS6-201ENST00000397942 PPFIA4O75335 1185 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 CCT5P48643 541 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 ANTXR2P58335 489 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 ABCB5Q2M3G0 1257 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 ZNF335Q9H4Z2 1342 aaPredicted RBP13.64□□□□□ -0.23
SOCS6-201ENST00000397942 MTF1Q14872 753 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 MB21D1Q8N884 522 aa13.64□□□□□ -0.23
SOCS6-201ENST00000397942 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.64□□□□□ -0.23
SOCS6-201ENST00000397942 LGALS16A8MUM7 142 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 RNF40O75150 1001 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 ATP2A2P16615 1042 aaKnown RBP13.63□□□□□ -0.23
SOCS6-201ENST00000397942 LIG3P49916 1009 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 KIF11P52732 1056 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 WDR24Q96S15 920 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 SWAP70Q9UH65 585 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 PALLDQ8WX93 1383 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 PRR29P0C7W0 189 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 DENND2CQ68D51 928 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 FAM205CA6NFA0 338 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 FTCDO95954 541 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 MRPS25P82663 173 aaKnown RBP13.63□□□□□ -0.23
SOCS6-201ENST00000397942 STRN3Q13033 797 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 TRPC3Q13507 836 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 ALKBH5Q6P6C2 394 aaKnown RBP13.63□□□□□ -0.23
SOCS6-201ENST00000397942 CCDC63Q8NA47 563 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 FAM84BQ96KN1 310 aaPredicted RBP13.63□□□□□ -0.23
SOCS6-201ENST00000397942 THAP9Q9H5L6 903 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 PP2D1A8MPX8 630 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 POLR2MP0CAP2 368 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 NT5C2P49902 561 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 UAP1Q16222 522 aaPredicted RBP13.63□□□□□ -0.23
SOCS6-201ENST00000397942 TXNDC16Q9P2K2 825 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 MRPL11Q9Y3B7 192 aaKnown RBP13.63□□□□□ -0.23
SOCS6-201ENST00000397942 TESPA1A2RU30 521 aaPredicted RBP13.63□□□□□ -0.23
SOCS6-201ENST00000397942 KRT15P19012 456 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 ATP5DP30049 168 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 CCZ1BP86790 482 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 CCZ1P86791 482 aaPredicted RBP13.63□□□□□ -0.23
SOCS6-201ENST00000397942 CC2D1AQ6P1N0 951 aaPredicted RBP13.63□□□□□ -0.23
SOCS6-201ENST00000397942 INTS8Q75QN2 995 aaKnown RBP13.63□□□□□ -0.23
SOCS6-201ENST00000397942 TUBE1Q9UJT0 475 aa13.63□□□□□ -0.23
SOCS6-201ENST00000397942 LAMC1P11047 1609 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 MEIS1O00470 390 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 CSF1RP07333 972 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 GYS2P54840 703 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 LRCH2Q5VUJ6 765 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 SMC6Q96SB8 1091 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 BHMT2Q9H2M3 363 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 ABHD10Q9NUJ1 306 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 CLIC2O15247 247 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 LRRC63Q05C16 580 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 TXNRD1Q16881 649 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 GPR101Q96P66 508 aaPredicted RBP13.62□□□□□ -0.23
SOCS6-201ENST00000397942 HOMER3Q9NSC5 361 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 RNF14Q9UBS8 474 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 XKR9Q5GH70 373 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 FAM186BQ8IYM0 893 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 KCNB2Q92953 911 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 MAGOHBQ96A72 148 aaKnown RBP13.62□□□□□ -0.23
SOCS6-201ENST00000397942 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.62□□□□□ -0.23
SOCS6-201ENST00000397942 AGTPBP1Q9UPW5 1226 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 GJA3Q9Y6H8 435 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 FAM133AQ8N9E0 248 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 PICK1Q9NRD5 415 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 SERPINA10Q9UK55 444 aa13.62□□□□□ -0.23
SOCS6-201ENST00000397942 POTEMA6NI47 508 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 EPHB4P54760 987 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 UBE2SQ16763 222 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 TAOK1Q7L7X3 1001 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 SENP2Q9HC62 589 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 UTYO14607 1347 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 DLATP10515 647 aaKnown RBP13.61□□□□□ -0.23
SOCS6-201ENST00000397942 UBXN2AP68543 259 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 NRKQ7Z2Y5 1582 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 ZBED4O75132 1171 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 TTC19Q6DKK2 380 aaPredicted RBP13.61□□□□□ -0.23
SOCS6-201ENST00000397942 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 STIM2Q9P246 746 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 LRRN2O75325 713 aa13.61□□□□□ -0.23
SOCS6-201ENST00000397942 RPS6KA4O75676 772 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms